Top 10 genes with highest correlation to Rv3560c/fadE30:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3564/fadE33 | (cc=0.6699) | info on Rv3564/fadE33 |
| Rv3549c/- | (cc=0.6632) | info on Rv3549c/- |
| Rv3502c/- | (cc=0.6579) | info on Rv3502c/- |
| Rv0199/- | (cc=0.6424) | info on Rv0199/- |
| Rv3542c/- | (cc=0.6417) | info on Rv3542c/- |
| Rv3543c/fadE29 | (cc=0.6342) | info on Rv3543c/fadE29 |
| Rv0390/- | (cc=0.6) | info on Rv0390/- |
| Rv0655/mkl | (cc=0.5874) | info on Rv0655/mkl |
| Rv3569c/hsaD | (cc=0.577) | info on Rv3569c/hsaD |
| Rv3563/fadE32 | (cc=0.5738) | info on Rv3563/fadE32 |
Correlation of Rv3560c/fadE30 with Rv3549c/-
Normalized LFCs for Rv3560c/fadE30:
(description and provenance of datasets)
| Rv3560c/fadE30 | Rv3549c/- | |
| Fe_supp_jason_reseq | 0.096 | -1.26 |
| low_pH_jason_reseq | -0.751 | 2.25 |
| NO_jason_reseq | 0.097 | 0.866 |
| B6_jason_reseq | -2.522 | -0.837 |
| MHCII_jason_reseq | -2.793 | -3.049 |
| Isoniazid02 | -0.249 | -0.447 |
| Rifampicin4 | -0.596 | -1.703 |
| Ethambutol3 | -0.67 | 1.058 |
| Meropenem3 | 0.28 | -0.649 |
| Vancomycin16 | -0.427 | -0.281 |
| Rv2680_day32 | -1.864 | -0.852 |
| H37Rv_KO_MarP | -0.103 | -0.484 |
| hypoxia_3wks | 0.801 | -0.754 |
| hypoxia_6wks | -0.125 | -0.779 |
| glycerol | 0.682 | 1.008 |
| cholesterol | -3.559 | -3.148 |
| AJ | -3.037 | -2.005 |
| Bibs02 | -4.145 | -3.331 |
| Bibs02c | -4.568 | -3.66 |
| BL6 | -1.436 | -1.24 |
| BL6a | -3.769 | -2.174 |
| BXD01 | -1.065 | -0.813 |
| BXD010 | 0.442 | -0.385 |
| BXD011 | -1.353 | -0.858 |
| BXD03 | -0.495 | -0.209 |
| BXD04 | 0.184 | 0.411 |
| BXD05 | -1.762 | -2.452 |
| BXD06 | -2.059 | -1.323 |
| BXD07 | -1.103 | -1.197 |
| BXD08 | -0.732 | -0.572 |
| BXD09 | -1.004 | -0.662 |
| CAST | -3.454 | -2.132 |
| CCcont | 0.156 | -0.765 |
| DS01 | -2.642 | -3.302 |
| DS02 | 1.672 | -0.058 |
| DS04 | -3.466 | -1.036 |
| DS0c | -2.303 | -0.614 |
| GP01 | -1.364 | -1.539 |
| GP02 | -1.533 | -1.65 |
| GP0c | -0.165 | 0.432 |
| NOD | 0.109 | -1.103 |
| NZO | -1.133 | -0.67 |
| PWK | -3.615 | -1.526 |
| H37Rv_KO_CtpC | -2.37 | -2.842 |
| H37Rv_KO_CtpD | -1.381 | -2.216 |
| H37Rv_KO_Rv1272 | 0.583 | 0.877 |
| H37Rv_KO_SugABC | 0.869 | 1.692 |
| H37Rv_KO_MbtN | -1.504 | -1.253 |
| Trans05 | -0.305 | -0.242 |
| macrophage_unactivated | 1.067 | -1.146 |
| IL1 | -0.394 | -0.243 |
| Rapamycin | 0.417 | -0.522 |
| Tcell | -2.281 | -0.411 |
| GMCSF | 1.613 | -0.449 |
| IFNab | 1.418 | 0.236 |
| IFNg | -0.174 | 0.208 |
| IFNg_GMCSF1 | 0.902 | 0.698 |
| Rv1432_day32 | -2.095 | -0.18 |
| Rv1565c_day32 | -2.458 | -3.172 |
| secA2_input | -0.806 | -0.476 |
| delta_Rv3594 | -1.291 | 0.584 |
| delta_Rv3717 | -1.19 | 0.457 |
| delta_Rv3811 | -1.112 | 0.626 |
| delta_Rv0954 | -1.31 | -0.174 |
| PonA1 | -0.724 | -0.223 |
| EccD1_KO | 0.934 | 0.98 |
| EspI_KO | 0.756 | 1.115 |
| PE35_KO | 0.659 | 0.394 |
| PPE68_KO | 0.0 | 0.637 |
| glycerol2 | -1.899 | -0.08 |
| lignocerate | -2.255 | 0.161 |
| oleate | -1.575 | -1.126 |
| phosphatidylcholine | -1.774 | -0.48 |
| acetate | -2.671 | -0.095 |
| glucAc | -1.687 | 0.485 |
| Rv0950ko | -0.648 | 0.85 |
| Rv1096ko | 1.034 | 1.737 |
| Rv3684ko | 0.645 | 0.924 |
| delta_otsA_trehalose | 0.124 | 0.823 |