Top 10 genes with highest correlation to Rv3534c/hsaF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3535c/hsaG | (cc=0.7344) | info on Rv3535c/hsaG |
| Rv3616c/espA | (cc=0.7107) | info on Rv3616c/espA |
| Rv1568/bioA | (cc=0.7014) | info on Rv1568/bioA |
| Rv3869/eccB1 | (cc=0.6964) | info on Rv3869/eccB1 |
| Rv3551/- | (cc=0.6948) | info on Rv3551/- |
| Rv3559c/- | (cc=0.6947) | info on Rv3559c/- |
| Rv0485/- | (cc=0.6935) | info on Rv0485/- |
| Rv3870/eccCa1 | (cc=0.689) | info on Rv3870/eccCa1 |
| Rv3883c/mycP1 | (cc=0.6861) | info on Rv3883c/mycP1 |
| Rv1405c/- | (cc=0.6793) | info on Rv1405c/- |
Correlation of Rv3534c/hsaF with Rv1568/bioA
Normalized LFCs for Rv3534c/hsaF:
(description and provenance of datasets)
| Rv3534c/hsaF | Rv1568/bioA | |
| Fe_supp_jason_reseq | 0.076 | 0.395 |
| low_pH_jason_reseq | 1.079 | -0.239 |
| NO_jason_reseq | 0.326 | 0.239 |
| B6_jason_reseq | -1.249 | -4.106 |
| MHCII_jason_reseq | -1.495 | -3.512 |
| Isoniazid02 | -0.31 | 0.215 |
| Rifampicin4 | 0.233 | 0.401 |
| Ethambutol3 | -0.013 | -0.377 |
| Meropenem3 | -0.095 | -0.265 |
| Vancomycin16 | -0.058 | 0.127 |
| Rv2680_day32 | -0.735 | -3.765 |
| H37Rv_KO_MarP | 0.903 | -0.202 |
| hypoxia_3wks | -0.758 | 0.427 |
| hypoxia_6wks | -1.011 | 0.098 |
| glycerol | 0.268 | -6.0 |
| cholesterol | -1.797 | -4.527 |
| AJ | -2.457 | -6.0 |
| Bibs02 | -1.423 | -5.898 |
| Bibs02c | -1.576 | -6.0 |
| BL6 | -1.006 | -4.035 |
| BL6a | -1.99 | -6.0 |
| BXD01 | -1.968 | -4.071 |
| BXD010 | -0.611 | -4.003 |
| BXD011 | -1.761 | -3.121 |
| BXD03 | -2.75 | -3.185 |
| BXD04 | -2.152 | -3.754 |
| BXD05 | -1.688 | -3.771 |
| BXD06 | -2.323 | -4.306 |
| BXD07 | -1.736 | -4.328 |
| BXD08 | -1.295 | -4.157 |
| BXD09 | -1.781 | -4.533 |
| CAST | -1.997 | -5.642 |
| CCcont | -0.193 | -1.046 |
| DS01 | -1.983 | -6.0 |
| DS02 | 0.153 | -6.0 |
| DS04 | -1.366 | -4.659 |
| DS0c | -1.164 | -6.0 |
| GP01 | -1.953 | -2.637 |
| GP02 | -2.671 | -2.331 |
| GP0c | -1.482 | 0.031 |
| NOD | -2.379 | -4.914 |
| NZO | -1.984 | -6.0 |
| PWK | -1.971 | -5.789 |
| H37Rv_KO_CtpC | -2.245 | -4.242 |
| H37Rv_KO_CtpD | -2.688 | -2.771 |
| H37Rv_KO_Rv1272 | -0.907 | -3.683 |
| H37Rv_KO_SugABC | -0.252 | -1.29 |
| H37Rv_KO_MbtN | 0.446 | -0.066 |
| Trans05 | -1.259 | -3.755 |
| macrophage_unactivated | -0.262 | 1.471 |
| IL1 | 0.647 | -0.415 |
| Rapamycin | 0.786 | 0.598 |
| Tcell | 0.606 | 1.554 |
| GMCSF | -0.261 | 0.906 |
| IFNab | -0.596 | 2.6 |
| IFNg | 0.118 | -1.042 |
| IFNg_GMCSF1 | -0.094 | -0.547 |
| Rv1432_day32 | -1.07 | -4.919 |
| Rv1565c_day32 | -1.845 | -6.0 |
| secA2_input | -0.402 | 0.593 |
| delta_Rv3594 | -1.329 | 0.289 |
| delta_Rv3717 | -0.181 | 0.569 |
| delta_Rv3811 | -0.717 | 0.196 |
| delta_Rv0954 | 0.105 | 0.979 |
| PonA1 | -0.35 | 0.6 |
| EccD1_KO | 0.579 | 0.178 |
| EspI_KO | -0.93 | -0.285 |
| PE35_KO | -0.134 | -0.376 |
| PPE68_KO | -0.221 | -0.685 |
| glycerol2 | 1.026 | 0.0 |
| lignocerate | 1.346 | 1.303 |
| oleate | -0.119 | 0.0 |
| phosphatidylcholine | 0.675 | 0.819 |
| acetate | 1.119 | 0.437 |
| glucAc | 1.019 | 0.0 |
| Rv0950ko | 0.305 | 0.7 |
| Rv1096ko | 0.57 | 0.872 |
| Rv3684ko | 0.547 | 0.76 |
| delta_otsA_trehalose | 0.977 | -0.65 |