Top 10 genes with highest correlation to Rv3529c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3278c/- | (cc=0.5797) | info on Rv3278c/- |
| Rv0805/- | (cc=0.5607) | info on Rv0805/- |
| Rv0055/rpsR1 | (cc=0.5458) | info on Rv0055/rpsR1 |
| Rv0260c/- | (cc=0.5378) | info on Rv0260c/- |
| Rv0905/echA6 | (cc=0.5318) | info on Rv0905/echA6 |
| Rv3300c/- | (cc=0.5246) | info on Rv3300c/- |
| Rv3397c/phyA | (cc=0.524) | info on Rv3397c/phyA |
| Rv0309/- | (cc=0.5227) | info on Rv0309/- |
| Rv0928/pstS3 | (cc=0.5218) | info on Rv0928/pstS3 |
| Rv2793c/truB | (cc=0.5198) | info on Rv2793c/truB |
Correlation of Rv3529c/- with Rv3300c/-
Normalized LFCs for Rv3529c/-:
(description and provenance of datasets)
| Rv3529c/- | Rv3300c/- | |
| Fe_supp_jason_reseq | -0.403 | -0.766 |
| low_pH_jason_reseq | -0.072 | -0.811 |
| NO_jason_reseq | -0.289 | -0.882 |
| B6_jason_reseq | 0.0 | -0.723 |
| MHCII_jason_reseq | -0.2 | -0.328 |
| Isoniazid02 | -0.521 | -1.192 |
| Rifampicin4 | -0.682 | -1.124 |
| Ethambutol3 | -0.146 | -1.131 |
| Meropenem3 | -0.666 | -0.907 |
| Vancomycin16 | -0.403 | -1.366 |
| Rv2680_day32 | -0.61 | 1.906 |
| H37Rv_KO_MarP | 0.038 | -0.317 |
| hypoxia_3wks | 0.052 | 0.255 |
| hypoxia_6wks | 0.336 | -0.572 |
| glycerol | 0.282 | 0.176 |
| cholesterol | 2.451 | -0.597 |
| AJ | 1.071 | -0.108 |
| Bibs02 | 0.595 | -0.694 |
| Bibs02c | -0.18 | 0.721 |
| BL6 | 1.274 | 2.159 |
| BL6a | 0.389 | 1.221 |
| BXD01 | 1.058 | 2.32 |
| BXD010 | 1.599 | -0.09 |
| BXD011 | 1.558 | 1.403 |
| BXD03 | 1.098 | 0.817 |
| BXD04 | 2.26 | 1.777 |
| BXD05 | 1.574 | 1.252 |
| BXD06 | 1.487 | 1.831 |
| BXD07 | 1.124 | 2.284 |
| BXD08 | 1.26 | 1.261 |
| BXD09 | 0.921 | 1.581 |
| CAST | 0.219 | 0.43 |
| CCcont | 1.006 | 1.573 |
| DS01 | 0.33 | 0.053 |
| DS02 | 0.173 | 0.189 |
| DS04 | 0.607 | 1.018 |
| DS0c | 0.484 | -0.05 |
| GP01 | -0.05 | -0.069 |
| GP02 | -0.312 | 0.936 |
| GP0c | 0.407 | 0.551 |
| NOD | 0.501 | 0.42 |
| NZO | 0.964 | 1.533 |
| PWK | 1.007 | 0.645 |
| H37Rv_KO_CtpC | 0.027 | 0.479 |
| H37Rv_KO_CtpD | -0.132 | -0.807 |
| H37Rv_KO_Rv1272 | -0.563 | 0.0 |
| H37Rv_KO_SugABC | 0.548 | 0.52 |
| H37Rv_KO_MbtN | -0.517 | 0.355 |
| Trans05 | -0.69 | -0.225 |
| macrophage_unactivated | -0.044 | 0.0 |
| IL1 | 0.365 | -0.314 |
| Rapamycin | -0.089 | 0.23 |
| Tcell | 0.091 | 1.268 |
| GMCSF | 0.185 | -0.428 |
| IFNab | -0.133 | -0.532 |
| IFNg | 0.433 | -1.098 |
| IFNg_GMCSF1 | -0.782 | -0.836 |
| Rv1432_day32 | 0.378 | 0.173 |
| Rv1565c_day32 | -0.954 | -0.573 |
| secA2_input | -0.916 | -1.024 |
| delta_Rv3594 | -0.828 | -0.858 |
| delta_Rv3717 | -0.995 | -0.508 |
| delta_Rv3811 | -0.248 | -0.732 |
| delta_Rv0954 | -0.317 | -0.39 |
| PonA1 | -1.633 | -0.095 |
| EccD1_KO | -0.243 | 1.168 |
| EspI_KO | 0.394 | 1.646 |
| PE35_KO | 0.204 | 0.755 |
| PPE68_KO | 0.368 | 0.953 |
| glycerol2 | 0.039 | 0.158 |
| lignocerate | 0.195 | 0.424 |
| oleate | -0.061 | 0.373 |
| phosphatidylcholine | 0.171 | 0.487 |
| acetate | 0.203 | -0.204 |
| glucAc | 0.099 | -0.069 |
| Rv0950ko | 0.211 | -0.292 |
| Rv1096ko | -0.109 | 0.531 |
| Rv3684ko | -0.118 | 1.729 |
| delta_otsA_trehalose | -0.292 | -0.67 |