Top 10 genes with highest correlation to Rv3529c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3278c/- | (cc=0.5797) | info on Rv3278c/- |
| Rv0805/- | (cc=0.5607) | info on Rv0805/- |
| Rv0055/rpsR1 | (cc=0.5458) | info on Rv0055/rpsR1 |
| Rv0260c/- | (cc=0.5378) | info on Rv0260c/- |
| Rv0905/echA6 | (cc=0.5318) | info on Rv0905/echA6 |
| Rv3300c/- | (cc=0.5246) | info on Rv3300c/- |
| Rv3397c/phyA | (cc=0.524) | info on Rv3397c/phyA |
| Rv0309/- | (cc=0.5227) | info on Rv0309/- |
| Rv0928/pstS3 | (cc=0.5218) | info on Rv0928/pstS3 |
| Rv2793c/truB | (cc=0.5198) | info on Rv2793c/truB |
Correlation of Rv3529c/- with Rv0905/echA6
Normalized LFCs for Rv3529c/-:
(description and provenance of datasets)
| Rv3529c/- | Rv0905/echA6 | |
| Fe_supp_jason_reseq | -0.403 | -2.259 |
| low_pH_jason_reseq | -0.072 | -0.49 |
| NO_jason_reseq | -0.289 | 1.657 |
| B6_jason_reseq | 0.0 | 1.222 |
| MHCII_jason_reseq | -0.2 | -0.433 |
| Isoniazid02 | -0.521 | 0.34 |
| Rifampicin4 | -0.682 | -3.111 |
| Ethambutol3 | -0.146 | -1.599 |
| Meropenem3 | -0.666 | 0.522 |
| Vancomycin16 | -0.403 | -3.396 |
| Rv2680_day32 | -0.61 | -0.351 |
| H37Rv_KO_MarP | 0.038 | 0.21 |
| hypoxia_3wks | 0.052 | -1.164 |
| hypoxia_6wks | 0.336 | 0.01 |
| glycerol | 0.282 | -1.148 |
| cholesterol | 2.451 | 0.277 |
| AJ | 1.071 | 0.729 |
| Bibs02 | 0.595 | 0.314 |
| Bibs02c | -0.18 | -0.506 |
| BL6 | 1.274 | 1.821 |
| BL6a | 0.389 | 1.036 |
| BXD01 | 1.058 | 1.479 |
| BXD010 | 1.599 | 1.386 |
| BXD011 | 1.558 | 1.455 |
| BXD03 | 1.098 | 1.735 |
| BXD04 | 2.26 | 1.832 |
| BXD05 | 1.574 | 1.43 |
| BXD06 | 1.487 | 2.109 |
| BXD07 | 1.124 | 1.615 |
| BXD08 | 1.26 | 0.967 |
| BXD09 | 0.921 | 2.253 |
| CAST | 0.219 | 1.021 |
| CCcont | 1.006 | -0.504 |
| DS01 | 0.33 | 0.07 |
| DS02 | 0.173 | -0.715 |
| DS04 | 0.607 | 0.091 |
| DS0c | 0.484 | 0.383 |
| GP01 | -0.05 | 0.73 |
| GP02 | -0.312 | -0.564 |
| GP0c | 0.407 | -0.166 |
| NOD | 0.501 | 0.106 |
| NZO | 0.964 | 0.796 |
| PWK | 1.007 | 2.299 |
| H37Rv_KO_CtpC | 0.027 | -1.363 |
| H37Rv_KO_CtpD | -0.132 | -1.15 |
| H37Rv_KO_Rv1272 | -0.563 | -0.331 |
| H37Rv_KO_SugABC | 0.548 | -2.293 |
| H37Rv_KO_MbtN | -0.517 | -1.012 |
| Trans05 | -0.69 | 1.324 |
| macrophage_unactivated | -0.044 | -1.029 |
| IL1 | 0.365 | 0.608 |
| Rapamycin | -0.089 | 0.353 |
| Tcell | 0.091 | -0.371 |
| GMCSF | 0.185 | 0.441 |
| IFNab | -0.133 | 0.668 |
| IFNg | 0.433 | 0.794 |
| IFNg_GMCSF1 | -0.782 | 0.707 |
| Rv1432_day32 | 0.378 | -1.194 |
| Rv1565c_day32 | -0.954 | -1.766 |
| secA2_input | -0.916 | -0.673 |
| delta_Rv3594 | -0.828 | -3.642 |
| delta_Rv3717 | -0.995 | -1.557 |
| delta_Rv3811 | -0.248 | -1.022 |
| delta_Rv0954 | -0.317 | -1.079 |
| PonA1 | -1.633 | -0.15 |
| EccD1_KO | -0.243 | 0.053 |
| EspI_KO | 0.394 | 0.046 |
| PE35_KO | 0.204 | -1.21 |
| PPE68_KO | 0.368 | -0.214 |
| glycerol2 | 0.039 | -1.138 |
| lignocerate | 0.195 | -1.062 |
| oleate | -0.061 | -1.151 |
| phosphatidylcholine | 0.171 | -0.661 |
| acetate | 0.203 | -0.143 |
| glucAc | 0.099 | 0.085 |
| Rv0950ko | 0.211 | -0.835 |
| Rv1096ko | -0.109 | 1.188 |
| Rv3684ko | -0.118 | 1.415 |
| delta_otsA_trehalose | -0.292 | 0.336 |