Top 10 genes with highest correlation to Rv3529c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3278c/- | (cc=0.5797) | info on Rv3278c/- |
| Rv0805/- | (cc=0.5607) | info on Rv0805/- |
| Rv0055/rpsR1 | (cc=0.5458) | info on Rv0055/rpsR1 |
| Rv0260c/- | (cc=0.5378) | info on Rv0260c/- |
| Rv0905/echA6 | (cc=0.5318) | info on Rv0905/echA6 |
| Rv3300c/- | (cc=0.5246) | info on Rv3300c/- |
| Rv3397c/phyA | (cc=0.524) | info on Rv3397c/phyA |
| Rv0309/- | (cc=0.5227) | info on Rv0309/- |
| Rv0928/pstS3 | (cc=0.5218) | info on Rv0928/pstS3 |
| Rv2793c/truB | (cc=0.5198) | info on Rv2793c/truB |
Correlation of Rv3529c/- with Rv0805/-
Normalized LFCs for Rv3529c/-:
(description and provenance of datasets)
| Rv3529c/- | Rv0805/- | |
| Fe_supp_jason_reseq | -0.403 | -0.609 |
| low_pH_jason_reseq | -0.072 | 2.615 |
| NO_jason_reseq | -0.289 | -3.686 |
| B6_jason_reseq | 0.0 | -1.743 |
| MHCII_jason_reseq | -0.2 | -3.887 |
| Isoniazid02 | -0.521 | 1.139 |
| Rifampicin4 | -0.682 | -2.534 |
| Ethambutol3 | -0.146 | -0.993 |
| Meropenem3 | -0.666 | -0.847 |
| Vancomycin16 | -0.403 | -0.034 |
| Rv2680_day32 | -0.61 | 1.826 |
| H37Rv_KO_MarP | 0.038 | -1.515 |
| hypoxia_3wks | 0.052 | -0.215 |
| hypoxia_6wks | 0.336 | -2.249 |
| glycerol | 0.282 | 1.701 |
| cholesterol | 2.451 | -0.676 |
| AJ | 1.071 | 2.04 |
| Bibs02 | 0.595 | -0.159 |
| Bibs02c | -0.18 | 1.082 |
| BL6 | 1.274 | 0.439 |
| BL6a | 0.389 | 3.122 |
| BXD01 | 1.058 | 6.0 |
| BXD010 | 1.599 | 3.308 |
| BXD011 | 1.558 | 2.293 |
| BXD03 | 1.098 | 3.901 |
| BXD04 | 2.26 | 5.495 |
| BXD05 | 1.574 | 2.33 |
| BXD06 | 1.487 | 4.573 |
| BXD07 | 1.124 | 3.297 |
| BXD08 | 1.26 | 2.623 |
| BXD09 | 0.921 | 3.807 |
| CAST | 0.219 | 1.468 |
| CCcont | 1.006 | 3.702 |
| DS01 | 0.33 | 2.962 |
| DS02 | 0.173 | 1.011 |
| DS04 | 0.607 | 0.5 |
| DS0c | 0.484 | 3.685 |
| GP01 | -0.05 | -0.946 |
| GP02 | -0.312 | -0.568 |
| GP0c | 0.407 | -1.245 |
| NOD | 0.501 | 0.983 |
| NZO | 0.964 | 2.932 |
| PWK | 1.007 | -0.261 |
| H37Rv_KO_CtpC | 0.027 | -0.758 |
| H37Rv_KO_CtpD | -0.132 | 1.382 |
| H37Rv_KO_Rv1272 | -0.563 | 0.454 |
| H37Rv_KO_SugABC | 0.548 | 0.041 |
| H37Rv_KO_MbtN | -0.517 | 0.809 |
| Trans05 | -0.69 | 1.482 |
| macrophage_unactivated | -0.044 | 0.884 |
| IL1 | 0.365 | -2.669 |
| Rapamycin | -0.089 | -0.5 |
| Tcell | 0.091 | -1.352 |
| GMCSF | 0.185 | -1.096 |
| IFNab | -0.133 | 0.302 |
| IFNg | 0.433 | -2.157 |
| IFNg_GMCSF1 | -0.782 | -1.524 |
| Rv1432_day32 | 0.378 | -1.036 |
| Rv1565c_day32 | -0.954 | -1.848 |
| secA2_input | -0.916 | -0.479 |
| delta_Rv3594 | -0.828 | -2.756 |
| delta_Rv3717 | -0.995 | -4.43 |
| delta_Rv3811 | -0.248 | -3.096 |
| delta_Rv0954 | -0.317 | -1.676 |
| PonA1 | -1.633 | -0.617 |
| EccD1_KO | -0.243 | -1.46 |
| EspI_KO | 0.394 | -1.155 |
| PE35_KO | 0.204 | 0.589 |
| PPE68_KO | 0.368 | -0.211 |
| glycerol2 | 0.039 | -0.916 |
| lignocerate | 0.195 | -0.23 |
| oleate | -0.061 | 1.015 |
| phosphatidylcholine | 0.171 | -1.752 |
| acetate | 0.203 | 0.121 |
| glucAc | 0.099 | -0.146 |
| Rv0950ko | 0.211 | 0.187 |
| Rv1096ko | -0.109 | -1.004 |
| Rv3684ko | -0.118 | -0.298 |
| delta_otsA_trehalose | -0.292 | 1.785 |