Top 10 genes with highest correlation to Rv3529c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3278c/- | (cc=0.5797) | info on Rv3278c/- |
| Rv0805/- | (cc=0.5607) | info on Rv0805/- |
| Rv0055/rpsR1 | (cc=0.5458) | info on Rv0055/rpsR1 |
| Rv0260c/- | (cc=0.5378) | info on Rv0260c/- |
| Rv0905/echA6 | (cc=0.5318) | info on Rv0905/echA6 |
| Rv3300c/- | (cc=0.5246) | info on Rv3300c/- |
| Rv3397c/phyA | (cc=0.524) | info on Rv3397c/phyA |
| Rv0309/- | (cc=0.5227) | info on Rv0309/- |
| Rv0928/pstS3 | (cc=0.5218) | info on Rv0928/pstS3 |
| Rv2793c/truB | (cc=0.5198) | info on Rv2793c/truB |
Correlation of Rv3529c/- with Rv0928/pstS3
Normalized LFCs for Rv3529c/-:
(description and provenance of datasets)
| Rv3529c/- | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | -0.403 | -3.391 |
| low_pH_jason_reseq | -0.072 | 1.549 |
| NO_jason_reseq | -0.289 | -3.363 |
| B6_jason_reseq | 0.0 | 0.406 |
| MHCII_jason_reseq | -0.2 | 0.372 |
| Isoniazid02 | -0.521 | 0.156 |
| Rifampicin4 | -0.682 | -4.059 |
| Ethambutol3 | -0.146 | -0.989 |
| Meropenem3 | -0.666 | -2.653 |
| Vancomycin16 | -0.403 | -2.26 |
| Rv2680_day32 | -0.61 | 3.982 |
| H37Rv_KO_MarP | 0.038 | -2.74 |
| hypoxia_3wks | 0.052 | -3.413 |
| hypoxia_6wks | 0.336 | 1.128 |
| glycerol | 0.282 | 4.051 |
| cholesterol | 2.451 | 3.767 |
| AJ | 1.071 | 1.99 |
| Bibs02 | 0.595 | 1.819 |
| Bibs02c | -0.18 | 2.23 |
| BL6 | 1.274 | 5.545 |
| BL6a | 0.389 | 6.0 |
| BXD01 | 1.058 | 6.0 |
| BXD010 | 1.599 | 6.0 |
| BXD011 | 1.558 | 6.0 |
| BXD03 | 1.098 | 5.608 |
| BXD04 | 2.26 | 6.0 |
| BXD05 | 1.574 | 6.0 |
| BXD06 | 1.487 | 6.0 |
| BXD07 | 1.124 | 6.0 |
| BXD08 | 1.26 | 6.0 |
| BXD09 | 0.921 | 6.0 |
| CAST | 0.219 | 2.334 |
| CCcont | 1.006 | 3.228 |
| DS01 | 0.33 | 0.0 |
| DS02 | 0.173 | 0.101 |
| DS04 | 0.607 | 2.0 |
| DS0c | 0.484 | 1.053 |
| GP01 | -0.05 | 5.887 |
| GP02 | -0.312 | 5.592 |
| GP0c | 0.407 | 6.0 |
| NOD | 0.501 | 0.649 |
| NZO | 0.964 | 2.227 |
| PWK | 1.007 | 4.575 |
| H37Rv_KO_CtpC | 0.027 | 3.13 |
| H37Rv_KO_CtpD | -0.132 | 1.414 |
| H37Rv_KO_Rv1272 | -0.563 | 4.357 |
| H37Rv_KO_SugABC | 0.548 | 3.955 |
| H37Rv_KO_MbtN | -0.517 | 6.0 |
| Trans05 | -0.69 | 5.513 |
| macrophage_unactivated | -0.044 | -2.632 |
| IL1 | 0.365 | -3.073 |
| Rapamycin | -0.089 | -3.492 |
| Tcell | 0.091 | -2.47 |
| GMCSF | 0.185 | -3.11 |
| IFNab | -0.133 | 2.618 |
| IFNg | 0.433 | -5.161 |
| IFNg_GMCSF1 | -0.782 | -4.672 |
| Rv1432_day32 | 0.378 | 6.0 |
| Rv1565c_day32 | -0.954 | -0.314 |
| secA2_input | -0.916 | -1.969 |
| delta_Rv3594 | -0.828 | -0.055 |
| delta_Rv3717 | -0.995 | 2.024 |
| delta_Rv3811 | -0.248 | 0.581 |
| delta_Rv0954 | -0.317 | -3.635 |
| PonA1 | -1.633 | -3.624 |
| EccD1_KO | -0.243 | -2.447 |
| EspI_KO | 0.394 | -1.258 |
| PE35_KO | 0.204 | -0.557 |
| PPE68_KO | 0.368 | -1.51 |
| glycerol2 | 0.039 | -4.89 |
| lignocerate | 0.195 | -1.422 |
| oleate | -0.061 | -3.927 |
| phosphatidylcholine | 0.171 | -2.553 |
| acetate | 0.203 | -0.17 |
| glucAc | 0.099 | -0.089 |
| Rv0950ko | 0.211 | -3.986 |
| Rv1096ko | -0.109 | 1.674 |
| Rv3684ko | -0.118 | 0.082 |
| delta_otsA_trehalose | -0.292 | -0.532 |