Top 10 genes with highest correlation to Rv3529c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3278c/- | (cc=0.5797) | info on Rv3278c/- |
| Rv0805/- | (cc=0.5607) | info on Rv0805/- |
| Rv0055/rpsR1 | (cc=0.5458) | info on Rv0055/rpsR1 |
| Rv0260c/- | (cc=0.5378) | info on Rv0260c/- |
| Rv0905/echA6 | (cc=0.5318) | info on Rv0905/echA6 |
| Rv3300c/- | (cc=0.5246) | info on Rv3300c/- |
| Rv3397c/phyA | (cc=0.524) | info on Rv3397c/phyA |
| Rv0309/- | (cc=0.5227) | info on Rv0309/- |
| Rv0928/pstS3 | (cc=0.5218) | info on Rv0928/pstS3 |
| Rv2793c/truB | (cc=0.5198) | info on Rv2793c/truB |
Correlation of Rv3529c/- with Rv3278c/-
Normalized LFCs for Rv3529c/-:
(description and provenance of datasets)
| Rv3529c/- | Rv3278c/- | |
| Fe_supp_jason_reseq | -0.403 | 1.468 |
| low_pH_jason_reseq | -0.072 | 0.462 |
| NO_jason_reseq | -0.289 | 0.307 |
| B6_jason_reseq | 0.0 | -0.034 |
| MHCII_jason_reseq | -0.2 | -0.278 |
| Isoniazid02 | -0.521 | 1.231 |
| Rifampicin4 | -0.682 | -0.417 |
| Ethambutol3 | -0.146 | -1.301 |
| Meropenem3 | -0.666 | 0.45 |
| Vancomycin16 | -0.403 | -0.117 |
| Rv2680_day32 | -0.61 | -0.947 |
| H37Rv_KO_MarP | 0.038 | -0.313 |
| hypoxia_3wks | 0.052 | -0.08 |
| hypoxia_6wks | 0.336 | -0.944 |
| glycerol | 0.282 | 0.089 |
| cholesterol | 2.451 | 0.435 |
| AJ | 1.071 | 2.054 |
| Bibs02 | 0.595 | -0.86 |
| Bibs02c | -0.18 | 0.405 |
| BL6 | 1.274 | 1.231 |
| BL6a | 0.389 | 1.83 |
| BXD01 | 1.058 | 1.482 |
| BXD010 | 1.599 | 2.103 |
| BXD011 | 1.558 | 1.654 |
| BXD03 | 1.098 | 2.582 |
| BXD04 | 2.26 | 2.541 |
| BXD05 | 1.574 | 2.114 |
| BXD06 | 1.487 | 2.357 |
| BXD07 | 1.124 | 1.526 |
| BXD08 | 1.26 | 1.779 |
| BXD09 | 0.921 | 1.464 |
| CAST | 0.219 | 1.351 |
| CCcont | 1.006 | 2.094 |
| DS01 | 0.33 | 0.814 |
| DS02 | 0.173 | 0.603 |
| DS04 | 0.607 | 1.221 |
| DS0c | 0.484 | 1.216 |
| GP01 | -0.05 | -0.537 |
| GP02 | -0.312 | 1.062 |
| GP0c | 0.407 | -0.642 |
| NOD | 0.501 | 1.808 |
| NZO | 0.964 | 1.519 |
| PWK | 1.007 | 3.493 |
| H37Rv_KO_CtpC | 0.027 | -0.385 |
| H37Rv_KO_CtpD | -0.132 | 0.074 |
| H37Rv_KO_Rv1272 | -0.563 | 1.648 |
| H37Rv_KO_SugABC | 0.548 | 0.555 |
| H37Rv_KO_MbtN | -0.517 | 0.605 |
| Trans05 | -0.69 | 1.446 |
| macrophage_unactivated | -0.044 | -0.426 |
| IL1 | 0.365 | -1.883 |
| Rapamycin | -0.089 | -1.544 |
| Tcell | 0.091 | -0.544 |
| GMCSF | 0.185 | -0.943 |
| IFNab | -0.133 | -0.928 |
| IFNg | 0.433 | 0.182 |
| IFNg_GMCSF1 | -0.782 | 0.848 |
| Rv1432_day32 | 0.378 | 0.08 |
| Rv1565c_day32 | -0.954 | -0.218 |
| secA2_input | -0.916 | -0.229 |
| delta_Rv3594 | -0.828 | -0.714 |
| delta_Rv3717 | -0.995 | -0.904 |
| delta_Rv3811 | -0.248 | -0.998 |
| delta_Rv0954 | -0.317 | -1.974 |
| PonA1 | -1.633 | -1.813 |
| EccD1_KO | -0.243 | -0.332 |
| EspI_KO | 0.394 | -0.154 |
| PE35_KO | 0.204 | -0.239 |
| PPE68_KO | 0.368 | -0.262 |
| glycerol2 | 0.039 | -0.343 |
| lignocerate | 0.195 | 1.15 |
| oleate | -0.061 | -1.109 |
| phosphatidylcholine | 0.171 | 0.64 |
| acetate | 0.203 | 0.602 |
| glucAc | 0.099 | 0.61 |
| Rv0950ko | 0.211 | -0.256 |
| Rv1096ko | -0.109 | 0.0 |
| Rv3684ko | -0.118 | 0.059 |
| delta_otsA_trehalose | -0.292 | -0.945 |