Top 10 genes with highest correlation to Rv3484/cpsA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1590/- | (cc=0.7674) | info on Rv1590/- |
| Rv1568/bioA | (cc=0.7583) | info on Rv1568/bioA |
| Rv1589/bioB | (cc=0.7549) | info on Rv1589/bioB |
| Rv3871/eccCb1 | (cc=0.7541) | info on Rv3871/eccCb1 |
| Rv3869/eccB1 | (cc=0.7348) | info on Rv3869/eccB1 |
| Rv3870/eccCa1 | (cc=0.7337) | info on Rv3870/eccCa1 |
| Rv3882c/eccE1 | (cc=0.7311) | info on Rv3882c/eccE1 |
| Rv3616c/espA | (cc=0.7272) | info on Rv3616c/espA |
| Rv0655/mkl | (cc=0.7226) | info on Rv0655/mkl |
| Rv3883c/mycP1 | (cc=0.7211) | info on Rv3883c/mycP1 |
Correlation of Rv3484/cpsA with Rv1589/bioB
Normalized LFCs for Rv3484/cpsA:
(description and provenance of datasets)
| Rv3484/cpsA | Rv1589/bioB | |
| Fe_supp_jason_reseq | -1.301 | 0.849 |
| low_pH_jason_reseq | -1.318 | -1.268 |
| NO_jason_reseq | 0.95 | 0.223 |
| B6_jason_reseq | -5.113 | -3.371 |
| MHCII_jason_reseq | -3.589 | -2.397 |
| Isoniazid02 | 1.024 | -1.656 |
| Rifampicin4 | -4.021 | 0.198 |
| Ethambutol3 | 0.911 | -0.174 |
| Meropenem3 | 1.791 | 1.255 |
| Vancomycin16 | 0.332 | -0.138 |
| Rv2680_day32 | -3.023 | -4.017 |
| H37Rv_KO_MarP | -2.091 | -0.392 |
| hypoxia_3wks | 5.957 | 0.227 |
| hypoxia_6wks | 6.0 | -0.42 |
| glycerol | -5.475 | -6.0 |
| cholesterol | -1.067 | -4.449 |
| AJ | -6.0 | -6.0 |
| Bibs02 | -3.786 | -5.616 |
| Bibs02c | -6.0 | -6.0 |
| BL6 | -2.704 | -3.718 |
| BL6a | -4.585 | -5.111 |
| BXD01 | -3.759 | -4.001 |
| BXD010 | -3.373 | -3.934 |
| BXD011 | -2.753 | -3.206 |
| BXD03 | -2.307 | -3.58 |
| BXD04 | -3.084 | -1.441 |
| BXD05 | -2.786 | -3.159 |
| BXD06 | -3.852 | -4.1 |
| BXD07 | -3.754 | -4.253 |
| BXD08 | -3.838 | -3.832 |
| BXD09 | -4.195 | -4.316 |
| CAST | -5.899 | -5.943 |
| CCcont | 0.495 | -0.025 |
| DS01 | -6.0 | -6.0 |
| DS02 | -6.0 | -6.0 |
| DS04 | -3.433 | -3.872 |
| DS0c | -5.556 | -6.0 |
| GP01 | -1.814 | -2.317 |
| GP02 | -1.973 | -1.832 |
| GP0c | 1.453 | 0.733 |
| NOD | -5.199 | -5.519 |
| NZO | -5.757 | -5.929 |
| PWK | -5.482 | -5.83 |
| H37Rv_KO_CtpC | -1.429 | -4.192 |
| H37Rv_KO_CtpD | -2.123 | -2.195 |
| H37Rv_KO_Rv1272 | -3.428 | -2.444 |
| H37Rv_KO_SugABC | -0.988 | -2.014 |
| H37Rv_KO_MbtN | 3.329 | -0.331 |
| Trans05 | -2.078 | -3.554 |
| macrophage_unactivated | -2.809 | 2.333 |
| IL1 | -0.486 | 0.181 |
| Rapamycin | -1.648 | -0.319 |
| Tcell | -1.326 | 1.492 |
| GMCSF | -0.364 | 1.706 |
| IFNab | 0.674 | 3.099 |
| IFNg | -0.513 | 0.353 |
| IFNg_GMCSF1 | -1.103 | -0.773 |
| Rv1432_day32 | -3.159 | -4.133 |
| Rv1565c_day32 | -3.27 | -4.498 |
| secA2_input | -0.56 | 0.099 |
| delta_Rv3594 | 0.109 | -0.112 |
| delta_Rv3717 | 1.111 | 0.152 |
| delta_Rv3811 | 0.297 | 0.345 |
| delta_Rv0954 | -1.443 | 0.181 |
| PonA1 | -3.094 | -0.118 |
| EccD1_KO | -0.283 | -0.257 |
| EspI_KO | -0.827 | -0.305 |
| PE35_KO | -1.175 | -0.414 |
| PPE68_KO | -1.443 | 0.07 |
| glycerol2 | -1.188 | 0.0 |
| lignocerate | -1.033 | 0.168 |
| oleate | -1.202 | 0.0 |
| phosphatidylcholine | -1.188 | 0.0 |
| acetate | -0.136 | 0.63 |
| glucAc | 0.081 | 0.392 |
| Rv0950ko | -0.344 | -0.434 |
| Rv1096ko | -0.745 | -0.112 |
| Rv3684ko | 1.238 | -0.868 |
| delta_otsA_trehalose | 1.732 | 1.462 |