Top 10 genes with highest correlation to Rv3434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0356c/- | (cc=0.4637) | info on Rv0356c/- |
| Rv2092c/helY | (cc=0.4191) | info on Rv2092c/helY |
| Rv1765c/- | (cc=0.409) | info on Rv1765c/- |
| Rv1069c/- | (cc=0.3818) | info on Rv1069c/- |
| Rv3824c/papA1 | (cc=0.3777) | info on Rv3824c/papA1 |
| Rv3435c/- | (cc=0.3642) | info on Rv3435c/- |
| Rv1057/- | (cc=0.3593) | info on Rv1057/- |
| Rv2136c/- | (cc=0.358) | info on Rv2136c/- |
| Rv2241/aceE | (cc=0.3524) | info on Rv2241/aceE |
| Rv0344c/lpqJ | (cc=0.349) | info on Rv0344c/lpqJ |
Correlation of Rv3434c/- with Rv3435c/-
Normalized LFCs for Rv3434c/-:
(description and provenance of datasets)
| Rv3434c/- | Rv3435c/- | |
| Fe_supp_jason_reseq | 0.968 | 0.38 |
| low_pH_jason_reseq | -0.125 | -1.606 |
| NO_jason_reseq | 1.386 | 0.121 |
| B6_jason_reseq | -0.071 | 0.311 |
| MHCII_jason_reseq | -0.233 | 0.701 |
| Isoniazid02 | -1.026 | -1.359 |
| Rifampicin4 | 0.249 | -1.107 |
| Ethambutol3 | 1.035 | -0.049 |
| Meropenem3 | -1.355 | -1.004 |
| Vancomycin16 | -0.788 | -0.939 |
| Rv2680_day32 | -1.43 | -0.409 |
| H37Rv_KO_MarP | 0.34 | 0.488 |
| hypoxia_3wks | -2.069 | -0.542 |
| hypoxia_6wks | -1.355 | -1.071 |
| glycerol | -1.024 | -0.881 |
| cholesterol | 0.018 | 0.151 |
| AJ | 1.007 | 0.121 |
| Bibs02 | 0.033 | -0.164 |
| Bibs02c | -0.174 | 0.385 |
| BL6 | -0.868 | -0.322 |
| BL6a | -0.375 | -0.235 |
| BXD01 | -0.858 | -0.501 |
| BXD010 | -0.196 | -0.232 |
| BXD011 | -0.168 | -0.345 |
| BXD03 | -0.742 | -0.232 |
| BXD04 | 0.323 | -0.519 |
| BXD05 | -0.168 | -0.323 |
| BXD06 | -0.421 | -0.683 |
| BXD07 | -0.545 | -0.318 |
| BXD08 | -0.662 | -0.516 |
| BXD09 | -0.225 | -0.487 |
| CAST | -0.27 | 0.235 |
| CCcont | 0.133 | -0.363 |
| DS01 | 0.115 | 0.275 |
| DS02 | -0.632 | -0.339 |
| DS04 | 0.392 | 0.174 |
| DS0c | -0.526 | -0.03 |
| GP01 | 0.884 | 0.041 |
| GP02 | -0.133 | 0.585 |
| GP0c | 0.521 | -0.572 |
| NOD | -0.545 | 1.434 |
| NZO | 0.199 | 0.721 |
| PWK | 0.632 | 0.361 |
| H37Rv_KO_CtpC | 0.311 | 0.034 |
| H37Rv_KO_CtpD | 0.294 | 0.429 |
| H37Rv_KO_Rv1272 | 0.248 | -0.065 |
| H37Rv_KO_SugABC | -0.652 | 0.359 |
| H37Rv_KO_MbtN | -0.026 | -0.914 |
| Trans05 | -0.209 | 0.396 |
| macrophage_unactivated | -0.997 | -0.726 |
| IL1 | 0.139 | -0.24 |
| Rapamycin | -0.838 | -0.433 |
| Tcell | -0.89 | -0.802 |
| GMCSF | 0.47 | 0.013 |
| IFNab | -0.372 | -0.713 |
| IFNg | -0.16 | -0.417 |
| IFNg_GMCSF1 | -0.594 | 0.324 |
| Rv1432_day32 | -0.601 | -0.349 |
| Rv1565c_day32 | -0.055 | 0.107 |
| secA2_input | -0.659 | 0.081 |
| delta_Rv3594 | -0.04 | -0.349 |
| delta_Rv3717 | -0.54 | -0.2 |
| delta_Rv3811 | 0.146 | -0.41 |
| delta_Rv0954 | 0.722 | 0.576 |
| PonA1 | 0.404 | -0.435 |
| EccD1_KO | -0.895 | -0.454 |
| EspI_KO | 0.816 | -0.468 |
| PE35_KO | 0.09 | -0.554 |
| PPE68_KO | 0.307 | -0.595 |
| glycerol2 | 0.091 | 0.741 |
| lignocerate | -0.963 | 0.494 |
| oleate | -0.461 | 0.686 |
| phosphatidylcholine | 0.055 | 1.046 |
| acetate | 0.309 | 0.539 |
| glucAc | -0.221 | 0.105 |
| Rv0950ko | 0.015 | -0.036 |
| Rv1096ko | -0.591 | -0.214 |
| Rv3684ko | -0.124 | -0.553 |
| delta_otsA_trehalose | 0.849 | 1.447 |