Top 10 genes with highest correlation to Rv3434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0356c/- | (cc=0.4637) | info on Rv0356c/- |
| Rv2092c/helY | (cc=0.4191) | info on Rv2092c/helY |
| Rv1765c/- | (cc=0.409) | info on Rv1765c/- |
| Rv1069c/- | (cc=0.3818) | info on Rv1069c/- |
| Rv3824c/papA1 | (cc=0.3777) | info on Rv3824c/papA1 |
| Rv3435c/- | (cc=0.3642) | info on Rv3435c/- |
| Rv1057/- | (cc=0.3593) | info on Rv1057/- |
| Rv2136c/- | (cc=0.358) | info on Rv2136c/- |
| Rv2241/aceE | (cc=0.3524) | info on Rv2241/aceE |
| Rv0344c/lpqJ | (cc=0.349) | info on Rv0344c/lpqJ |
Correlation of Rv3434c/- with Rv1057/-
Normalized LFCs for Rv3434c/-:
(description and provenance of datasets)
| Rv3434c/- | Rv1057/- | |
| Fe_supp_jason_reseq | 0.968 | -0.014 |
| low_pH_jason_reseq | -0.125 | 0.186 |
| NO_jason_reseq | 1.386 | 0.423 |
| B6_jason_reseq | -0.071 | 0.318 |
| MHCII_jason_reseq | -0.233 | 0.133 |
| Isoniazid02 | -1.026 | 0.026 |
| Rifampicin4 | 0.249 | -0.777 |
| Ethambutol3 | 1.035 | 1.098 |
| Meropenem3 | -1.355 | -0.067 |
| Vancomycin16 | -0.788 | -0.424 |
| Rv2680_day32 | -1.43 | -1.83 |
| H37Rv_KO_MarP | 0.34 | 0.752 |
| hypoxia_3wks | -2.069 | -0.941 |
| hypoxia_6wks | -1.355 | -0.382 |
| glycerol | -1.024 | 0.161 |
| cholesterol | 0.018 | 0.434 |
| AJ | 1.007 | -0.049 |
| Bibs02 | 0.033 | 0.419 |
| Bibs02c | -0.174 | -0.062 |
| BL6 | -0.868 | -0.023 |
| BL6a | -0.375 | -0.281 |
| BXD01 | -0.858 | -0.522 |
| BXD010 | -0.196 | -0.647 |
| BXD011 | -0.168 | -0.057 |
| BXD03 | -0.742 | -0.429 |
| BXD04 | 0.323 | -0.154 |
| BXD05 | -0.168 | -0.879 |
| BXD06 | -0.421 | -0.575 |
| BXD07 | -0.545 | -0.423 |
| BXD08 | -0.662 | -0.162 |
| BXD09 | -0.225 | -0.43 |
| CAST | -0.27 | 0.287 |
| CCcont | 0.133 | -0.427 |
| DS01 | 0.115 | 0.027 |
| DS02 | -0.632 | 0.038 |
| DS04 | 0.392 | -0.006 |
| DS0c | -0.526 | 0.167 |
| GP01 | 0.884 | 0.624 |
| GP02 | -0.133 | 0.614 |
| GP0c | 0.521 | -0.275 |
| NOD | -0.545 | 0.129 |
| NZO | 0.199 | -0.121 |
| PWK | 0.632 | -0.053 |
| H37Rv_KO_CtpC | 0.311 | -0.51 |
| H37Rv_KO_CtpD | 0.294 | 0.223 |
| H37Rv_KO_Rv1272 | 0.248 | -0.795 |
| H37Rv_KO_SugABC | -0.652 | -0.825 |
| H37Rv_KO_MbtN | -0.026 | -0.332 |
| Trans05 | -0.209 | -0.736 |
| macrophage_unactivated | -0.997 | 0.35 |
| IL1 | 0.139 | 0.062 |
| Rapamycin | -0.838 | 0.488 |
| Tcell | -0.89 | -0.485 |
| GMCSF | 0.47 | 0.356 |
| IFNab | -0.372 | -0.33 |
| IFNg | -0.16 | -0.086 |
| IFNg_GMCSF1 | -0.594 | 0.066 |
| Rv1432_day32 | -0.601 | 0.521 |
| Rv1565c_day32 | -0.055 | 0.118 |
| secA2_input | -0.659 | 0.41 |
| delta_Rv3594 | -0.04 | -0.109 |
| delta_Rv3717 | -0.54 | -0.31 |
| delta_Rv3811 | 0.146 | -0.644 |
| delta_Rv0954 | 0.722 | 0.271 |
| PonA1 | 0.404 | 0.105 |
| EccD1_KO | -0.895 | 0.585 |
| EspI_KO | 0.816 | 0.838 |
| PE35_KO | 0.09 | 0.163 |
| PPE68_KO | 0.307 | 0.336 |
| glycerol2 | 0.091 | 0.645 |
| lignocerate | -0.963 | 1.097 |
| oleate | -0.461 | -0.265 |
| phosphatidylcholine | 0.055 | 0.873 |
| acetate | 0.309 | 0.397 |
| glucAc | -0.221 | 0.369 |
| Rv0950ko | 0.015 | -0.045 |
| Rv1096ko | -0.591 | 0.0 |
| Rv3684ko | -0.124 | 0.295 |
| delta_otsA_trehalose | 0.849 | 1.013 |