Top 10 genes with highest correlation to Rv3434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0356c/- | (cc=0.4637) | info on Rv0356c/- |
| Rv2092c/helY | (cc=0.4191) | info on Rv2092c/helY |
| Rv1765c/- | (cc=0.409) | info on Rv1765c/- |
| Rv1069c/- | (cc=0.3818) | info on Rv1069c/- |
| Rv3824c/papA1 | (cc=0.3777) | info on Rv3824c/papA1 |
| Rv3435c/- | (cc=0.3642) | info on Rv3435c/- |
| Rv1057/- | (cc=0.3593) | info on Rv1057/- |
| Rv2136c/- | (cc=0.358) | info on Rv2136c/- |
| Rv2241/aceE | (cc=0.3524) | info on Rv2241/aceE |
| Rv0344c/lpqJ | (cc=0.349) | info on Rv0344c/lpqJ |
Correlation of Rv3434c/- with Rv2092c/helY
Normalized LFCs for Rv3434c/-:
(description and provenance of datasets)
| Rv3434c/- | Rv2092c/helY | |
| Fe_supp_jason_reseq | 0.968 | -0.489 |
| low_pH_jason_reseq | -0.125 | 0.694 |
| NO_jason_reseq | 1.386 | 1.612 |
| B6_jason_reseq | -0.071 | 0.391 |
| MHCII_jason_reseq | -0.233 | 0.112 |
| Isoniazid02 | -1.026 | -0.57 |
| Rifampicin4 | 0.249 | -0.271 |
| Ethambutol3 | 1.035 | 0.798 |
| Meropenem3 | -1.355 | -0.842 |
| Vancomycin16 | -0.788 | -0.528 |
| Rv2680_day32 | -1.43 | -0.387 |
| H37Rv_KO_MarP | 0.34 | -0.367 |
| hypoxia_3wks | -2.069 | -1.232 |
| hypoxia_6wks | -1.355 | -0.507 |
| glycerol | -1.024 | -0.041 |
| cholesterol | 0.018 | -0.037 |
| AJ | 1.007 | 0.034 |
| Bibs02 | 0.033 | 0.098 |
| Bibs02c | -0.174 | -0.243 |
| BL6 | -0.868 | -0.389 |
| BL6a | -0.375 | -0.122 |
| BXD01 | -0.858 | -0.422 |
| BXD010 | -0.196 | 0.044 |
| BXD011 | -0.168 | -0.078 |
| BXD03 | -0.742 | -0.265 |
| BXD04 | 0.323 | 0.649 |
| BXD05 | -0.168 | -0.323 |
| BXD06 | -0.421 | -0.199 |
| BXD07 | -0.545 | -0.215 |
| BXD08 | -0.662 | 0.108 |
| BXD09 | -0.225 | -0.373 |
| CAST | -0.27 | 1.188 |
| CCcont | 0.133 | -0.873 |
| DS01 | 0.115 | -0.299 |
| DS02 | -0.632 | -0.123 |
| DS04 | 0.392 | -0.202 |
| DS0c | -0.526 | -0.426 |
| GP01 | 0.884 | 0.019 |
| GP02 | -0.133 | 0.805 |
| GP0c | 0.521 | -0.059 |
| NOD | -0.545 | 0.391 |
| NZO | 0.199 | 0.172 |
| PWK | 0.632 | 0.669 |
| H37Rv_KO_CtpC | 0.311 | 0.22 |
| H37Rv_KO_CtpD | 0.294 | -0.058 |
| H37Rv_KO_Rv1272 | 0.248 | 0.292 |
| H37Rv_KO_SugABC | -0.652 | 0.019 |
| H37Rv_KO_MbtN | -0.026 | -0.075 |
| Trans05 | -0.209 | 0.686 |
| macrophage_unactivated | -0.997 | -0.574 |
| IL1 | 0.139 | -0.092 |
| Rapamycin | -0.838 | -0.424 |
| Tcell | -0.89 | -0.179 |
| GMCSF | 0.47 | -0.319 |
| IFNab | -0.372 | -0.048 |
| IFNg | -0.16 | 0.061 |
| IFNg_GMCSF1 | -0.594 | -0.025 |
| Rv1432_day32 | -0.601 | -0.103 |
| Rv1565c_day32 | -0.055 | 0.073 |
| secA2_input | -0.659 | 0.493 |
| delta_Rv3594 | -0.04 | -0.489 |
| delta_Rv3717 | -0.54 | -0.287 |
| delta_Rv3811 | 0.146 | -0.43 |
| delta_Rv0954 | 0.722 | -0.691 |
| PonA1 | 0.404 | -0.762 |
| EccD1_KO | -0.895 | 0.526 |
| EspI_KO | 0.816 | 0.607 |
| PE35_KO | 0.09 | 0.05 |
| PPE68_KO | 0.307 | 0.339 |
| glycerol2 | 0.091 | 0.055 |
| lignocerate | -0.963 | 0.138 |
| oleate | -0.461 | -0.155 |
| phosphatidylcholine | 0.055 | 0.626 |
| acetate | 0.309 | 0.527 |
| glucAc | -0.221 | -0.457 |
| Rv0950ko | 0.015 | -0.051 |
| Rv1096ko | -0.591 | -0.256 |
| Rv3684ko | -0.124 | 0.082 |
| delta_otsA_trehalose | 0.849 | 0.205 |