Top 10 genes with highest correlation to Rv3434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0356c/- | (cc=0.4637) | info on Rv0356c/- |
| Rv2092c/helY | (cc=0.4191) | info on Rv2092c/helY |
| Rv1765c/- | (cc=0.409) | info on Rv1765c/- |
| Rv1069c/- | (cc=0.3818) | info on Rv1069c/- |
| Rv3824c/papA1 | (cc=0.3777) | info on Rv3824c/papA1 |
| Rv3435c/- | (cc=0.3642) | info on Rv3435c/- |
| Rv1057/- | (cc=0.3593) | info on Rv1057/- |
| Rv2136c/- | (cc=0.358) | info on Rv2136c/- |
| Rv2241/aceE | (cc=0.3524) | info on Rv2241/aceE |
| Rv0344c/lpqJ | (cc=0.349) | info on Rv0344c/lpqJ |
Correlation of Rv3434c/- with Rv2136c/-
Normalized LFCs for Rv3434c/-:
(description and provenance of datasets)
| Rv3434c/- | Rv2136c/- | |
| Fe_supp_jason_reseq | 0.968 | -0.538 |
| low_pH_jason_reseq | -0.125 | -0.619 |
| NO_jason_reseq | 1.386 | -0.289 |
| B6_jason_reseq | -0.071 | -0.832 |
| MHCII_jason_reseq | -0.233 | 0.194 |
| Isoniazid02 | -1.026 | -0.829 |
| Rifampicin4 | 0.249 | -0.317 |
| Ethambutol3 | 1.035 | 1.389 |
| Meropenem3 | -1.355 | -0.779 |
| Vancomycin16 | -0.788 | 0.552 |
| Rv2680_day32 | -1.43 | -1.614 |
| H37Rv_KO_MarP | 0.34 | -2.565 |
| hypoxia_3wks | -2.069 | -0.128 |
| hypoxia_6wks | -1.355 | -0.656 |
| glycerol | -1.024 | -0.015 |
| cholesterol | 0.018 | -0.072 |
| AJ | 1.007 | 0.472 |
| Bibs02 | 0.033 | -0.065 |
| Bibs02c | -0.174 | 0.044 |
| BL6 | -0.868 | -0.129 |
| BL6a | -0.375 | -0.143 |
| BXD01 | -0.858 | -0.364 |
| BXD010 | -0.196 | -0.43 |
| BXD011 | -0.168 | -0.505 |
| BXD03 | -0.742 | -0.15 |
| BXD04 | 0.323 | 0.17 |
| BXD05 | -0.168 | -0.44 |
| BXD06 | -0.421 | -0.256 |
| BXD07 | -0.545 | -0.301 |
| BXD08 | -0.662 | -0.028 |
| BXD09 | -0.225 | -0.419 |
| CAST | -0.27 | 0.202 |
| CCcont | 0.133 | -0.097 |
| DS01 | 0.115 | 0.411 |
| DS02 | -0.632 | 0.692 |
| DS04 | 0.392 | 0.853 |
| DS0c | -0.526 | -0.108 |
| GP01 | 0.884 | 0.684 |
| GP02 | -0.133 | 1.008 |
| GP0c | 0.521 | 0.345 |
| NOD | -0.545 | -0.587 |
| NZO | 0.199 | 0.394 |
| PWK | 0.632 | 0.593 |
| H37Rv_KO_CtpC | 0.311 | 0.646 |
| H37Rv_KO_CtpD | 0.294 | 0.383 |
| H37Rv_KO_Rv1272 | 0.248 | 1.44 |
| H37Rv_KO_SugABC | -0.652 | -0.433 |
| H37Rv_KO_MbtN | -0.026 | 0.62 |
| Trans05 | -0.209 | 0.539 |
| macrophage_unactivated | -0.997 | -1.676 |
| IL1 | 0.139 | -0.792 |
| Rapamycin | -0.838 | -1.031 |
| Tcell | -0.89 | -1.049 |
| GMCSF | 0.47 | -1.36 |
| IFNab | -0.372 | -0.85 |
| IFNg | -0.16 | -0.214 |
| IFNg_GMCSF1 | -0.594 | -0.478 |
| Rv1432_day32 | -0.601 | 0.881 |
| Rv1565c_day32 | -0.055 | 0.638 |
| secA2_input | -0.659 | 0.755 |
| delta_Rv3594 | -0.04 | 0.252 |
| delta_Rv3717 | -0.54 | -0.283 |
| delta_Rv3811 | 0.146 | -0.291 |
| delta_Rv0954 | 0.722 | 0.89 |
| PonA1 | 0.404 | 0.572 |
| EccD1_KO | -0.895 | 0.072 |
| EspI_KO | 0.816 | 1.01 |
| PE35_KO | 0.09 | 1.178 |
| PPE68_KO | 0.307 | 1.094 |
| glycerol2 | 0.091 | -0.682 |
| lignocerate | -0.963 | -0.309 |
| oleate | -0.461 | 0.052 |
| phosphatidylcholine | 0.055 | 0.347 |
| acetate | 0.309 | -0.673 |
| glucAc | -0.221 | -0.652 |
| Rv0950ko | 0.015 | -0.081 |
| Rv1096ko | -0.591 | -1.173 |
| Rv3684ko | -0.124 | -0.458 |
| delta_otsA_trehalose | 0.849 | 0.093 |