Top 10 genes with highest correlation to Rv3434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0356c/- | (cc=0.4637) | info on Rv0356c/- |
| Rv2092c/helY | (cc=0.4191) | info on Rv2092c/helY |
| Rv1765c/- | (cc=0.409) | info on Rv1765c/- |
| Rv1069c/- | (cc=0.3818) | info on Rv1069c/- |
| Rv3824c/papA1 | (cc=0.3777) | info on Rv3824c/papA1 |
| Rv3435c/- | (cc=0.3642) | info on Rv3435c/- |
| Rv1057/- | (cc=0.3593) | info on Rv1057/- |
| Rv2136c/- | (cc=0.358) | info on Rv2136c/- |
| Rv2241/aceE | (cc=0.3524) | info on Rv2241/aceE |
| Rv0344c/lpqJ | (cc=0.349) | info on Rv0344c/lpqJ |
Correlation of Rv3434c/- with Rv2241/aceE
Normalized LFCs for Rv3434c/-:
(description and provenance of datasets)
| Rv3434c/- | Rv2241/aceE | |
| Fe_supp_jason_reseq | 0.968 | 3.471 |
| low_pH_jason_reseq | -0.125 | -0.848 |
| NO_jason_reseq | 1.386 | 3.555 |
| B6_jason_reseq | -0.071 | -1.298 |
| MHCII_jason_reseq | -0.233 | -0.926 |
| Isoniazid02 | -1.026 | -1.198 |
| Rifampicin4 | 0.249 | 1.037 |
| Ethambutol3 | 1.035 | -0.336 |
| Meropenem3 | -1.355 | -0.858 |
| Vancomycin16 | -0.788 | -1.157 |
| Rv2680_day32 | -1.43 | -0.359 |
| H37Rv_KO_MarP | 0.34 | -1.983 |
| hypoxia_3wks | -2.069 | -1.284 |
| hypoxia_6wks | -1.355 | -1.222 |
| glycerol | -1.024 | -0.554 |
| cholesterol | 0.018 | -0.398 |
| AJ | 1.007 | -0.405 |
| Bibs02 | 0.033 | -0.152 |
| Bibs02c | -0.174 | -0.574 |
| BL6 | -0.868 | 0.0 |
| BL6a | -0.375 | -0.165 |
| BXD01 | -0.858 | -0.109 |
| BXD010 | -0.196 | -0.352 |
| BXD011 | -0.168 | 0.099 |
| BXD03 | -0.742 | 1.032 |
| BXD04 | 0.323 | 0.347 |
| BXD05 | -0.168 | 0.377 |
| BXD06 | -0.421 | 0.796 |
| BXD07 | -0.545 | -0.115 |
| BXD08 | -0.662 | 0.0 |
| BXD09 | -0.225 | 0.109 |
| CAST | -0.27 | -0.192 |
| CCcont | 0.133 | 2.006 |
| DS01 | 0.115 | -0.648 |
| DS02 | -0.632 | -0.597 |
| DS04 | 0.392 | 0.0 |
| DS0c | -0.526 | -0.596 |
| GP01 | 0.884 | -0.271 |
| GP02 | -0.133 | -0.228 |
| GP0c | 0.521 | -0.227 |
| NOD | -0.545 | 0.174 |
| NZO | 0.199 | -0.166 |
| PWK | 0.632 | 1.34 |
| H37Rv_KO_CtpC | 0.311 | -0.135 |
| H37Rv_KO_CtpD | 0.294 | 0.189 |
| H37Rv_KO_Rv1272 | 0.248 | 0.0 |
| H37Rv_KO_SugABC | -0.652 | 0.591 |
| H37Rv_KO_MbtN | -0.026 | 1.313 |
| Trans05 | -0.209 | -0.109 |
| macrophage_unactivated | -0.997 | -1.016 |
| IL1 | 0.139 | -1.326 |
| Rapamycin | -0.838 | -1.795 |
| Tcell | -0.89 | -0.671 |
| GMCSF | 0.47 | -1.18 |
| IFNab | -0.372 | 0.281 |
| IFNg | -0.16 | -0.861 |
| IFNg_GMCSF1 | -0.594 | -1.405 |
| Rv1432_day32 | -0.601 | -0.884 |
| Rv1565c_day32 | -0.055 | 0.0 |
| secA2_input | -0.659 | 0.82 |
| delta_Rv3594 | -0.04 | 0.156 |
| delta_Rv3717 | -0.54 | 0.074 |
| delta_Rv3811 | 0.146 | -0.473 |
| delta_Rv0954 | 0.722 | -0.786 |
| PonA1 | 0.404 | 1.419 |
| EccD1_KO | -0.895 | -1.246 |
| EspI_KO | 0.816 | -1.218 |
| PE35_KO | 0.09 | -0.335 |
| PPE68_KO | 0.307 | -0.118 |
| glycerol2 | 0.091 | -0.193 |
| lignocerate | -0.963 | -0.168 |
| oleate | -0.461 | -0.196 |
| phosphatidylcholine | 0.055 | -0.193 |
| acetate | 0.309 | -0.229 |
| glucAc | -0.221 | 0.0 |
| Rv0950ko | 0.015 | 0.045 |
| Rv1096ko | -0.591 | 0.0 |
| Rv3684ko | -0.124 | 0.282 |
| delta_otsA_trehalose | 0.849 | -1.139 |