Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv3652/PE_PGRS60
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv3652/PE_PGRS60 | |
| Fe_supp_jason_reseq | 0.862 | -0.27 |
| low_pH_jason_reseq | -0.811 | 1.079 |
| NO_jason_reseq | -0.378 | 0.186 |
| B6_jason_reseq | 2.336 | 0.641 |
| MHCII_jason_reseq | 1.408 | 0.67 |
| Isoniazid02 | -0.626 | 0.33 |
| Rifampicin4 | -1.411 | -0.217 |
| Ethambutol3 | -1.063 | 0.169 |
| Meropenem3 | -0.727 | 0.153 |
| Vancomycin16 | -1.523 | 1.101 |
| Rv2680_day32 | 0.878 | 2.801 |
| H37Rv_KO_MarP | 1.054 | 0.104 |
| hypoxia_3wks | 1.308 | 0.618 |
| hypoxia_6wks | 0.38 | 0.084 |
| glycerol | 0.44 | 0.62 |
| cholesterol | 0.316 | 0.779 |
| AJ | -0.497 | -0.111 |
| Bibs02 | 0.115 | 0.699 |
| Bibs02c | -0.045 | -0.573 |
| BL6 | 0.722 | -1.002 |
| BL6a | -0.766 | -0.512 |
| BXD01 | -0.164 | -0.249 |
| BXD010 | -0.599 | -0.837 |
| BXD011 | 1.292 | -0.305 |
| BXD03 | -1.054 | -1.399 |
| BXD04 | -1.355 | -0.409 |
| BXD05 | -0.785 | -0.534 |
| BXD06 | -1.071 | -0.522 |
| BXD07 | -0.504 | -0.716 |
| BXD08 | -0.893 | -0.091 |
| BXD09 | -0.988 | -0.683 |
| CAST | 0.097 | 0.155 |
| CCcont | -0.724 | -1.008 |
| DS01 | 0.871 | 0.712 |
| DS02 | 0.859 | -0.26 |
| DS04 | 1.19 | 0.557 |
| DS0c | 0.872 | -0.508 |
| GP01 | -0.398 | -0.386 |
| GP02 | -0.454 | 0.445 |
| GP0c | -2.449 | -0.907 |
| NOD | -1.248 | -0.462 |
| NZO | -2.095 | 0.262 |
| PWK | -0.408 | -0.618 |
| H37Rv_KO_CtpC | -1.831 | -2.385 |
| H37Rv_KO_CtpD | -0.945 | -1.86 |
| H37Rv_KO_Rv1272 | -0.502 | -0.668 |
| H37Rv_KO_SugABC | -2.08 | -1.701 |
| H37Rv_KO_MbtN | -0.651 | -0.861 |
| Trans05 | -2.854 | -1.511 |
| macrophage_unactivated | -0.707 | 0.114 |
| IL1 | 0.311 | 1.21 |
| Rapamycin | -1.212 | -0.377 |
| Tcell | -0.199 | -0.222 |
| GMCSF | 0.227 | 0.61 |
| IFNab | 0.26 | 1.233 |
| IFNg | -1.163 | -0.139 |
| IFNg_GMCSF1 | -0.031 | 0.138 |
| Rv1432_day32 | -0.164 | 0.343 |
| Rv1565c_day32 | 0.351 | 0.722 |
| secA2_input | -0.224 | -0.258 |
| delta_Rv3594 | -0.165 | -0.376 |
| delta_Rv3717 | 0.39 | 0.789 |
| delta_Rv3811 | -0.589 | -0.291 |
| delta_Rv0954 | -0.107 | 0.247 |
| PonA1 | 1.355 | -0.455 |
| EccD1_KO | -0.391 | 0.638 |
| EspI_KO | -1.229 | 0.428 |
| PE35_KO | -1.146 | 1.152 |
| PPE68_KO | -0.835 | 0.729 |
| glycerol2 | -1.433 | 0.42 |
| lignocerate | -1.26 | -0.161 |
| oleate | -0.432 | 0.961 |
| phosphatidylcholine | -0.843 | 0.193 |
| acetate | -1.104 | -0.091 |
| glucAc | -1.196 | -0.6 |
| Rv0950ko | -0.464 | -0.226 |
| Rv1096ko | -0.274 | 0.422 |
| Rv3684ko | -1.402 | 0.177 |
| delta_otsA_trehalose | 1.34 | 1.871 |