Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv1453/-
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv1453/- | |
| Fe_supp_jason_reseq | 0.862 | 0.72 |
| low_pH_jason_reseq | -0.811 | 0.659 |
| NO_jason_reseq | -0.378 | -0.672 |
| B6_jason_reseq | 2.336 | 2.065 |
| MHCII_jason_reseq | 1.408 | 1.373 |
| Isoniazid02 | -0.626 | 1.302 |
| Rifampicin4 | -1.411 | 0.219 |
| Ethambutol3 | -1.063 | 0.876 |
| Meropenem3 | -0.727 | 0.7 |
| Vancomycin16 | -1.523 | 0.114 |
| Rv2680_day32 | 0.878 | 0.241 |
| H37Rv_KO_MarP | 1.054 | 0.793 |
| hypoxia_3wks | 1.308 | 0.905 |
| hypoxia_6wks | 0.38 | 1.054 |
| glycerol | 0.44 | -0.025 |
| cholesterol | 0.316 | -0.156 |
| AJ | -0.497 | 0.35 |
| Bibs02 | 0.115 | 0.738 |
| Bibs02c | -0.045 | 0.526 |
| BL6 | 0.722 | -1.143 |
| BL6a | -0.766 | -0.062 |
| BXD01 | -0.164 | -0.497 |
| BXD010 | -0.599 | -0.054 |
| BXD011 | 1.292 | -0.022 |
| BXD03 | -1.054 | -0.914 |
| BXD04 | -1.355 | -0.5 |
| BXD05 | -0.785 | -0.657 |
| BXD06 | -1.071 | -0.426 |
| BXD07 | -0.504 | -0.491 |
| BXD08 | -0.893 | -0.219 |
| BXD09 | -0.988 | -0.257 |
| CAST | 0.097 | -0.048 |
| CCcont | -0.724 | -1.652 |
| DS01 | 0.871 | 0.818 |
| DS02 | 0.859 | 0.756 |
| DS04 | 1.19 | 1.053 |
| DS0c | 0.872 | 1.053 |
| GP01 | -0.398 | -0.652 |
| GP02 | -0.454 | -1.909 |
| GP0c | -2.449 | -1.531 |
| NOD | -1.248 | 0.251 |
| NZO | -2.095 | 0.152 |
| PWK | -0.408 | 0.436 |
| H37Rv_KO_CtpC | -1.831 | -1.253 |
| H37Rv_KO_CtpD | -0.945 | 0.017 |
| H37Rv_KO_Rv1272 | -0.502 | -0.603 |
| H37Rv_KO_SugABC | -2.08 | -0.68 |
| H37Rv_KO_MbtN | -0.651 | -0.386 |
| Trans05 | -2.854 | -0.9 |
| macrophage_unactivated | -0.707 | -0.78 |
| IL1 | 0.311 | -0.528 |
| Rapamycin | -1.212 | -0.344 |
| Tcell | -0.199 | -0.261 |
| GMCSF | 0.227 | -0.232 |
| IFNab | 0.26 | -0.538 |
| IFNg | -1.163 | -0.794 |
| IFNg_GMCSF1 | -0.031 | -0.119 |
| Rv1432_day32 | -0.164 | 0.072 |
| Rv1565c_day32 | 0.351 | 0.264 |
| secA2_input | -0.224 | 0.41 |
| delta_Rv3594 | -0.165 | -0.118 |
| delta_Rv3717 | 0.39 | -1.099 |
| delta_Rv3811 | -0.589 | 0.079 |
| delta_Rv0954 | -0.107 | -0.846 |
| PonA1 | 1.355 | -0.374 |
| EccD1_KO | -0.391 | 0.503 |
| EspI_KO | -1.229 | -0.151 |
| PE35_KO | -1.146 | 0.277 |
| PPE68_KO | -0.835 | 0.336 |
| glycerol2 | -1.433 | 0.338 |
| lignocerate | -1.26 | 0.073 |
| oleate | -0.432 | 0.525 |
| phosphatidylcholine | -0.843 | 0.43 |
| acetate | -1.104 | -0.136 |
| glucAc | -1.196 | -0.174 |
| Rv0950ko | -0.464 | -0.32 |
| Rv1096ko | -0.274 | -0.787 |
| Rv3684ko | -1.402 | -0.331 |
| delta_otsA_trehalose | 1.34 | 1.851 |