Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv1184c/-
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv1184c/- | |
| Fe_supp_jason_reseq | 0.862 | 1.708 |
| low_pH_jason_reseq | -0.811 | -0.694 |
| NO_jason_reseq | -0.378 | -0.399 |
| B6_jason_reseq | 2.336 | 1.187 |
| MHCII_jason_reseq | 1.408 | 1.676 |
| Isoniazid02 | -0.626 | -0.202 |
| Rifampicin4 | -1.411 | -1.335 |
| Ethambutol3 | -1.063 | -0.734 |
| Meropenem3 | -0.727 | -0.83 |
| Vancomycin16 | -1.523 | -0.316 |
| Rv2680_day32 | 0.878 | 0.241 |
| H37Rv_KO_MarP | 1.054 | 0.185 |
| hypoxia_3wks | 1.308 | 0.223 |
| hypoxia_6wks | 0.38 | -0.265 |
| glycerol | 0.44 | -0.443 |
| cholesterol | 0.316 | -0.372 |
| AJ | -0.497 | -0.953 |
| Bibs02 | 0.115 | -0.114 |
| Bibs02c | -0.045 | -0.62 |
| BL6 | 0.722 | -1.109 |
| BL6a | -0.766 | -1.478 |
| BXD01 | -0.164 | -2.236 |
| BXD010 | -0.599 | -1.344 |
| BXD011 | 1.292 | -1.279 |
| BXD03 | -1.054 | -1.588 |
| BXD04 | -1.355 | -1.554 |
| BXD05 | -0.785 | -0.796 |
| BXD06 | -1.071 | -1.975 |
| BXD07 | -0.504 | -1.52 |
| BXD08 | -0.893 | -1.833 |
| BXD09 | -0.988 | -1.349 |
| CAST | 0.097 | -1.8 |
| CCcont | -0.724 | -0.784 |
| DS01 | 0.871 | -0.443 |
| DS02 | 0.859 | -0.057 |
| DS04 | 1.19 | -0.898 |
| DS0c | 0.872 | 0.162 |
| GP01 | -0.398 | -1.674 |
| GP02 | -0.454 | -1.879 |
| GP0c | -2.449 | -2.176 |
| NOD | -1.248 | -0.771 |
| NZO | -2.095 | -1.12 |
| PWK | -0.408 | -1.189 |
| H37Rv_KO_CtpC | -1.831 | -1.612 |
| H37Rv_KO_CtpD | -0.945 | -1.315 |
| H37Rv_KO_Rv1272 | -0.502 | -1.713 |
| H37Rv_KO_SugABC | -2.08 | -1.303 |
| H37Rv_KO_MbtN | -0.651 | -0.742 |
| Trans05 | -2.854 | -0.537 |
| macrophage_unactivated | -0.707 | -1.654 |
| IL1 | 0.311 | 1.584 |
| Rapamycin | -1.212 | 0.822 |
| Tcell | -0.199 | -1.978 |
| GMCSF | 0.227 | -0.293 |
| IFNab | 0.26 | 0.698 |
| IFNg | -1.163 | -0.297 |
| IFNg_GMCSF1 | -0.031 | 0.097 |
| Rv1432_day32 | -0.164 | -1.902 |
| Rv1565c_day32 | 0.351 | 0.212 |
| secA2_input | -0.224 | -0.603 |
| delta_Rv3594 | -0.165 | 0.724 |
| delta_Rv3717 | 0.39 | 0.131 |
| delta_Rv3811 | -0.589 | -0.462 |
| delta_Rv0954 | -0.107 | 0.487 |
| PonA1 | 1.355 | 0.634 |
| EccD1_KO | -0.391 | -2.424 |
| EspI_KO | -1.229 | -0.516 |
| PE35_KO | -1.146 | -1.502 |
| PPE68_KO | -0.835 | -1.245 |
| glycerol2 | -1.433 | 0.247 |
| lignocerate | -1.26 | 0.485 |
| oleate | -0.432 | -1.168 |
| phosphatidylcholine | -0.843 | -0.511 |
| acetate | -1.104 | 0.389 |
| glucAc | -1.196 | 0.035 |
| Rv0950ko | -0.464 | -0.196 |
| Rv1096ko | -0.274 | 0.401 |
| Rv3684ko | -1.402 | -0.573 |
| delta_otsA_trehalose | 1.34 | 0.206 |