Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv1653/argJ
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv1653/argJ | |
| Fe_supp_jason_reseq | 0.862 | 1.501 |
| low_pH_jason_reseq | -0.811 | 0.303 |
| NO_jason_reseq | -0.378 | -0.845 |
| B6_jason_reseq | 2.336 | 4.098 |
| MHCII_jason_reseq | 1.408 | 3.346 |
| Isoniazid02 | -0.626 | -0.749 |
| Rifampicin4 | -1.411 | -2.978 |
| Ethambutol3 | -1.063 | -1.103 |
| Meropenem3 | -0.727 | -1.899 |
| Vancomycin16 | -1.523 | 0.247 |
| Rv2680_day32 | 0.878 | -0.27 |
| H37Rv_KO_MarP | 1.054 | 1.552 |
| hypoxia_3wks | 1.308 | -0.55 |
| hypoxia_6wks | 0.38 | 1.645 |
| glycerol | 0.44 | 2.687 |
| cholesterol | 0.316 | 1.022 |
| AJ | -0.497 | 0.086 |
| Bibs02 | 0.115 | -0.898 |
| Bibs02c | -0.045 | 0.326 |
| BL6 | 0.722 | -0.652 |
| BL6a | -0.766 | 0.686 |
| BXD01 | -0.164 | -1.793 |
| BXD010 | -0.599 | -2.061 |
| BXD011 | 1.292 | -1.439 |
| BXD03 | -1.054 | -2.064 |
| BXD04 | -1.355 | -0.85 |
| BXD05 | -0.785 | -0.277 |
| BXD06 | -1.071 | -0.967 |
| BXD07 | -0.504 | -1.288 |
| BXD08 | -0.893 | -1.431 |
| BXD09 | -0.988 | -1.372 |
| CAST | 0.097 | 0.918 |
| CCcont | -0.724 | -1.686 |
| DS01 | 0.871 | 1.116 |
| DS02 | 0.859 | 1.656 |
| DS04 | 1.19 | 0.592 |
| DS0c | 0.872 | -0.878 |
| GP01 | -0.398 | -1.589 |
| GP02 | -0.454 | -1.498 |
| GP0c | -2.449 | -1.542 |
| NOD | -1.248 | -0.361 |
| NZO | -2.095 | -1.04 |
| PWK | -0.408 | -1.348 |
| H37Rv_KO_CtpC | -1.831 | -2.924 |
| H37Rv_KO_CtpD | -0.945 | -1.933 |
| H37Rv_KO_Rv1272 | -0.502 | -2.539 |
| H37Rv_KO_SugABC | -2.08 | -1.594 |
| H37Rv_KO_MbtN | -0.651 | -0.747 |
| Trans05 | -2.854 | -2.352 |
| macrophage_unactivated | -0.707 | 1.774 |
| IL1 | 0.311 | 1.528 |
| Rapamycin | -1.212 | 0.592 |
| Tcell | -0.199 | 0.427 |
| GMCSF | 0.227 | 0.09 |
| IFNab | 0.26 | -0.435 |
| IFNg | -1.163 | 0.516 |
| IFNg_GMCSF1 | -0.031 | 0.792 |
| Rv1432_day32 | -0.164 | 0.0 |
| Rv1565c_day32 | 0.351 | 0.0 |
| secA2_input | -0.224 | -0.87 |
| delta_Rv3594 | -0.165 | -0.193 |
| delta_Rv3717 | 0.39 | 0.405 |
| delta_Rv3811 | -0.589 | 0.0 |
| delta_Rv0954 | -0.107 | 0.353 |
| PonA1 | 1.355 | -0.898 |
| EccD1_KO | -0.391 | 3.032 |
| EspI_KO | -1.229 | 0.211 |
| PE35_KO | -1.146 | 1.631 |
| PPE68_KO | -0.835 | 1.449 |
| glycerol2 | -1.433 | 0.0 |
| lignocerate | -1.26 | 0.591 |
| oleate | -0.432 | 0.0 |
| phosphatidylcholine | -0.843 | 0.0 |
| acetate | -1.104 | 0.63 |
| glucAc | -1.196 | 0.701 |
| Rv0950ko | -0.464 | -1.462 |
| Rv1096ko | -0.274 | 1.405 |
| Rv3684ko | -1.402 | -0.999 |
| delta_otsA_trehalose | 1.34 | -2.029 |