Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv0848/cysK2
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv0848/cysK2 | |
| Fe_supp_jason_reseq | 0.862 | 0.221 |
| low_pH_jason_reseq | -0.811 | -0.214 |
| NO_jason_reseq | -0.378 | 1.152 |
| B6_jason_reseq | 2.336 | 1.176 |
| MHCII_jason_reseq | 1.408 | 0.917 |
| Isoniazid02 | -0.626 | 0.469 |
| Rifampicin4 | -1.411 | 0.46 |
| Ethambutol3 | -1.063 | 2.419 |
| Meropenem3 | -0.727 | 0.053 |
| Vancomycin16 | -1.523 | 0.708 |
| Rv2680_day32 | 0.878 | 1.311 |
| H37Rv_KO_MarP | 1.054 | 0.772 |
| hypoxia_3wks | 1.308 | 0.694 |
| hypoxia_6wks | 0.38 | 0.768 |
| glycerol | 0.44 | -0.494 |
| cholesterol | 0.316 | -0.242 |
| AJ | -0.497 | -0.568 |
| Bibs02 | 0.115 | 0.989 |
| Bibs02c | -0.045 | -0.097 |
| BL6 | 0.722 | -0.35 |
| BL6a | -0.766 | -0.462 |
| BXD01 | -0.164 | -0.349 |
| BXD010 | -0.599 | -0.555 |
| BXD011 | 1.292 | -0.958 |
| BXD03 | -1.054 | -0.92 |
| BXD04 | -1.355 | -0.303 |
| BXD05 | -0.785 | -0.314 |
| BXD06 | -1.071 | -0.238 |
| BXD07 | -0.504 | 0.315 |
| BXD08 | -0.893 | -0.153 |
| BXD09 | -0.988 | -0.772 |
| CAST | 0.097 | -0.511 |
| CCcont | -0.724 | -0.688 |
| DS01 | 0.871 | 0.104 |
| DS02 | 0.859 | 0.208 |
| DS04 | 1.19 | 0.233 |
| DS0c | 0.872 | -0.121 |
| GP01 | -0.398 | -1.039 |
| GP02 | -0.454 | -1.521 |
| GP0c | -2.449 | -1.053 |
| NOD | -1.248 | -1.489 |
| NZO | -2.095 | -0.558 |
| PWK | -0.408 | 0.087 |
| H37Rv_KO_CtpC | -1.831 | -0.638 |
| H37Rv_KO_CtpD | -0.945 | -0.775 |
| H37Rv_KO_Rv1272 | -0.502 | -1.009 |
| H37Rv_KO_SugABC | -2.08 | -1.068 |
| H37Rv_KO_MbtN | -0.651 | -0.351 |
| Trans05 | -2.854 | -1.408 |
| macrophage_unactivated | -0.707 | -0.193 |
| IL1 | 0.311 | 0.116 |
| Rapamycin | -1.212 | 0.12 |
| Tcell | -0.199 | -0.13 |
| GMCSF | 0.227 | 0.203 |
| IFNab | 0.26 | -0.06 |
| IFNg | -1.163 | -0.163 |
| IFNg_GMCSF1 | -0.031 | 0.949 |
| Rv1432_day32 | -0.164 | -0.398 |
| Rv1565c_day32 | 0.351 | -0.449 |
| secA2_input | -0.224 | 0.326 |
| delta_Rv3594 | -0.165 | 1.106 |
| delta_Rv3717 | 0.39 | 0.2 |
| delta_Rv3811 | -0.589 | 0.449 |
| delta_Rv0954 | -0.107 | 1.99 |
| PonA1 | 1.355 | 0.38 |
| EccD1_KO | -0.391 | 0.072 |
| EspI_KO | -1.229 | 0.248 |
| PE35_KO | -1.146 | -0.134 |
| PPE68_KO | -0.835 | 0.0 |
| glycerol2 | -1.433 | -0.577 |
| lignocerate | -1.26 | -0.799 |
| oleate | -0.432 | -0.24 |
| phosphatidylcholine | -0.843 | -0.522 |
| acetate | -1.104 | -1.039 |
| glucAc | -1.196 | -1.065 |
| Rv0950ko | -0.464 | -0.829 |
| Rv1096ko | -0.274 | 0.546 |
| Rv3684ko | -1.402 | -0.193 |
| delta_otsA_trehalose | 1.34 | 1.139 |