Top 10 genes with highest correlation to Rv3364c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0785/- | (cc=0.5439) | info on Rv0785/- |
| Rv1453/- | (cc=0.4779) | info on Rv1453/- |
| Rv3635/- | (cc=0.4475) | info on Rv3635/- |
| Rv0848/cysK2 | (cc=0.4468) | info on Rv0848/cysK2 |
| Rv1539/lspA | (cc=0.4434) | info on Rv1539/lspA |
| Rv1184c/- | (cc=0.441) | info on Rv1184c/- |
| Rv3652/PE_PGRS60 | (cc=0.4351) | info on Rv3652/PE_PGRS60 |
| Rv1653/argJ | (cc=0.4261) | info on Rv1653/argJ |
| Rv2831/echA16 | (cc=0.4252) | info on Rv2831/echA16 |
| Rv0233/nrdB | (cc=0.4245) | info on Rv0233/nrdB |
Correlation of Rv3364c/- with Rv0785/-
Normalized LFCs for Rv3364c/-:
(description and provenance of datasets)
| Rv3364c/- | Rv0785/- | |
| Fe_supp_jason_reseq | 0.862 | 0.758 |
| low_pH_jason_reseq | -0.811 | -0.328 |
| NO_jason_reseq | -0.378 | -0.701 |
| B6_jason_reseq | 2.336 | 0.892 |
| MHCII_jason_reseq | 1.408 | 1.296 |
| Isoniazid02 | -0.626 | 0.067 |
| Rifampicin4 | -1.411 | 0.325 |
| Ethambutol3 | -1.063 | -0.382 |
| Meropenem3 | -0.727 | -0.71 |
| Vancomycin16 | -1.523 | 0.202 |
| Rv2680_day32 | 0.878 | -0.206 |
| H37Rv_KO_MarP | 1.054 | 0.0 |
| hypoxia_3wks | 1.308 | -0.056 |
| hypoxia_6wks | 0.38 | -0.029 |
| glycerol | 0.44 | -0.471 |
| cholesterol | 0.316 | 0.286 |
| AJ | -0.497 | -0.129 |
| Bibs02 | 0.115 | 1.029 |
| Bibs02c | -0.045 | 0.694 |
| BL6 | 0.722 | -0.426 |
| BL6a | -0.766 | 0.0 |
| BXD01 | -0.164 | -0.098 |
| BXD010 | -0.599 | -0.012 |
| BXD011 | 1.292 | 0.456 |
| BXD03 | -1.054 | 0.404 |
| BXD04 | -1.355 | -0.288 |
| BXD05 | -0.785 | -0.254 |
| BXD06 | -1.071 | 0.203 |
| BXD07 | -0.504 | 0.012 |
| BXD08 | -0.893 | 0.047 |
| BXD09 | -0.988 | 0.038 |
| CAST | 0.097 | 0.656 |
| CCcont | -0.724 | -0.528 |
| DS01 | 0.871 | 1.239 |
| DS02 | 0.859 | 1.303 |
| DS04 | 1.19 | 1.677 |
| DS0c | 0.872 | 1.266 |
| GP01 | -0.398 | -0.388 |
| GP02 | -0.454 | 0.486 |
| GP0c | -2.449 | -0.599 |
| NOD | -1.248 | 0.428 |
| NZO | -2.095 | 0.191 |
| PWK | -0.408 | 0.702 |
| H37Rv_KO_CtpC | -1.831 | -0.748 |
| H37Rv_KO_CtpD | -0.945 | -0.133 |
| H37Rv_KO_Rv1272 | -0.502 | -0.796 |
| H37Rv_KO_SugABC | -2.08 | -1.292 |
| H37Rv_KO_MbtN | -0.651 | 0.518 |
| Trans05 | -2.854 | -0.866 |
| macrophage_unactivated | -0.707 | 0.306 |
| IL1 | 0.311 | 0.718 |
| Rapamycin | -1.212 | 0.509 |
| Tcell | -0.199 | 0.541 |
| GMCSF | 0.227 | 0.098 |
| IFNab | 0.26 | 0.148 |
| IFNg | -1.163 | 0.382 |
| IFNg_GMCSF1 | -0.031 | 0.726 |
| Rv1432_day32 | -0.164 | 0.89 |
| Rv1565c_day32 | 0.351 | 0.381 |
| secA2_input | -0.224 | 0.157 |
| delta_Rv3594 | -0.165 | 0.948 |
| delta_Rv3717 | 0.39 | 0.78 |
| delta_Rv3811 | -0.589 | 0.631 |
| delta_Rv0954 | -0.107 | 0.293 |
| PonA1 | 1.355 | -0.127 |
| EccD1_KO | -0.391 | 0.069 |
| EspI_KO | -1.229 | 0.451 |
| PE35_KO | -1.146 | 0.236 |
| PPE68_KO | -0.835 | -0.205 |
| glycerol2 | -1.433 | -0.223 |
| lignocerate | -1.26 | -0.256 |
| oleate | -0.432 | -0.373 |
| phosphatidylcholine | -0.843 | -0.108 |
| acetate | -1.104 | -0.407 |
| glucAc | -1.196 | -0.389 |
| Rv0950ko | -0.464 | -0.419 |
| Rv1096ko | -0.274 | 0.486 |
| Rv3684ko | -1.402 | -0.321 |
| delta_otsA_trehalose | 1.34 | 1.004 |