Top 10 genes with highest correlation to Rv3278c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0055/rpsR1 | (cc=0.6948) | info on Rv0055/rpsR1 |
| Rv2430c/PPE41 | (cc=0.6406) | info on Rv2430c/PPE41 |
| Rv0805/- | (cc=0.6386) | info on Rv0805/- |
| Rv1072/- | (cc=0.6209) | info on Rv1072/- |
| Rv0371c/- | (cc=0.6117) | info on Rv0371c/- |
| Rv3142c/- | (cc=0.6095) | info on Rv3142c/- |
| Rv0668/rpoC | (cc=0.6074) | info on Rv0668/rpoC |
| Rv1239c/corA | (cc=0.5995) | info on Rv1239c/corA |
| Rv2793c/truB | (cc=0.5974) | info on Rv2793c/truB |
| Rv3421c/- | (cc=0.5842) | info on Rv3421c/- |
Correlation of Rv3278c/- with Rv2793c/truB
Normalized LFCs for Rv3278c/-:
(description and provenance of datasets)
| Rv3278c/- | Rv2793c/truB | |
| Fe_supp_jason_reseq | 1.468 | -0.608 |
| low_pH_jason_reseq | 0.462 | 4.833 |
| NO_jason_reseq | 0.307 | 4.258 |
| B6_jason_reseq | -0.034 | -0.921 |
| MHCII_jason_reseq | -0.278 | -2.248 |
| Isoniazid02 | 1.231 | -1.823 |
| Rifampicin4 | -0.417 | -1.516 |
| Ethambutol3 | -1.301 | -3.205 |
| Meropenem3 | 0.45 | -2.159 |
| Vancomycin16 | -0.117 | -2.175 |
| Rv2680_day32 | -0.947 | -0.947 |
| H37Rv_KO_MarP | -0.313 | -1.139 |
| hypoxia_3wks | -0.08 | 0.0 |
| hypoxia_6wks | -0.944 | -0.163 |
| glycerol | 0.089 | 0.753 |
| cholesterol | 0.435 | -0.509 |
| AJ | 2.054 | 0.866 |
| Bibs02 | -0.86 | 0.0 |
| Bibs02c | 0.405 | 0.887 |
| BL6 | 1.231 | 1.039 |
| BL6a | 1.83 | 1.712 |
| BXD01 | 1.482 | 4.61 |
| BXD010 | 2.103 | 2.013 |
| BXD011 | 1.654 | 1.797 |
| BXD03 | 2.582 | 2.515 |
| BXD04 | 2.541 | 4.249 |
| BXD05 | 2.114 | 0.636 |
| BXD06 | 2.357 | 2.913 |
| BXD07 | 1.526 | 1.871 |
| BXD08 | 1.779 | 2.89 |
| BXD09 | 1.464 | 2.232 |
| CAST | 1.351 | 1.582 |
| CCcont | 2.094 | 1.291 |
| DS01 | 0.814 | 0.479 |
| DS02 | 0.603 | 0.922 |
| DS04 | 1.221 | 0.0 |
| DS0c | 1.216 | -0.547 |
| GP01 | -0.537 | -0.347 |
| GP02 | 1.062 | 0.06 |
| GP0c | -0.642 | -0.457 |
| NOD | 1.808 | -0.789 |
| NZO | 1.519 | 2.387 |
| PWK | 3.493 | 3.574 |
| H37Rv_KO_CtpC | -0.385 | 3.196 |
| H37Rv_KO_CtpD | 0.074 | 0.0 |
| H37Rv_KO_Rv1272 | 1.648 | 0.912 |
| H37Rv_KO_SugABC | 0.555 | 1.006 |
| H37Rv_KO_MbtN | 0.605 | 0.0 |
| Trans05 | 1.446 | 1.041 |
| macrophage_unactivated | -0.426 | -2.374 |
| IL1 | -1.883 | -1.056 |
| Rapamycin | -1.544 | -0.592 |
| Tcell | -0.544 | 0.808 |
| GMCSF | -0.943 | -1.605 |
| IFNab | -0.928 | -0.741 |
| IFNg | 0.182 | -0.249 |
| IFNg_GMCSF1 | 0.848 | -1.91 |
| Rv1432_day32 | 0.08 | -0.441 |
| Rv1565c_day32 | -0.218 | -1.579 |
| secA2_input | -0.229 | 1.404 |
| delta_Rv3594 | -0.714 | -3.694 |
| delta_Rv3717 | -0.904 | -2.848 |
| delta_Rv3811 | -0.998 | -2.974 |
| delta_Rv0954 | -1.974 | -3.46 |
| PonA1 | -1.813 | -0.035 |
| EccD1_KO | -0.332 | 0.0 |
| EspI_KO | -0.154 | 0.305 |
| PE35_KO | -0.239 | 0.601 |
| PPE68_KO | -0.262 | 1.501 |
| glycerol2 | -0.343 | -1.401 |
| lignocerate | 1.15 | -0.947 |
| oleate | -1.109 | -1.596 |
| phosphatidylcholine | 0.64 | -1.239 |
| acetate | 0.602 | 0.535 |
| glucAc | 0.61 | 1.065 |
| Rv0950ko | -0.256 | 0.139 |
| Rv1096ko | 0.0 | -1.113 |
| Rv3684ko | 0.059 | -0.314 |
| delta_otsA_trehalose | -0.945 | 0.0 |