Top 10 genes with highest correlation to Rv3278c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0055/rpsR1 | (cc=0.6948) | info on Rv0055/rpsR1 |
| Rv2430c/PPE41 | (cc=0.6406) | info on Rv2430c/PPE41 |
| Rv0805/- | (cc=0.6386) | info on Rv0805/- |
| Rv1072/- | (cc=0.6209) | info on Rv1072/- |
| Rv0371c/- | (cc=0.6117) | info on Rv0371c/- |
| Rv3142c/- | (cc=0.6095) | info on Rv3142c/- |
| Rv0668/rpoC | (cc=0.6074) | info on Rv0668/rpoC |
| Rv1239c/corA | (cc=0.5995) | info on Rv1239c/corA |
| Rv2793c/truB | (cc=0.5974) | info on Rv2793c/truB |
| Rv3421c/- | (cc=0.5842) | info on Rv3421c/- |
Correlation of Rv3278c/- with Rv1239c/corA
Normalized LFCs for Rv3278c/-:
(description and provenance of datasets)
| Rv3278c/- | Rv1239c/corA | |
| Fe_supp_jason_reseq | 1.468 | -0.69 |
| low_pH_jason_reseq | 0.462 | 1.064 |
| NO_jason_reseq | 0.307 | 1.433 |
| B6_jason_reseq | -0.034 | 0.087 |
| MHCII_jason_reseq | -0.278 | -1.266 |
| Isoniazid02 | 1.231 | 0.036 |
| Rifampicin4 | -0.417 | -0.625 |
| Ethambutol3 | -1.301 | 0.0 |
| Meropenem3 | 0.45 | -1.067 |
| Vancomycin16 | -0.117 | -0.459 |
| Rv2680_day32 | -0.947 | 0.318 |
| H37Rv_KO_MarP | -0.313 | 0.505 |
| hypoxia_3wks | -0.08 | -2.117 |
| hypoxia_6wks | -0.944 | 0.848 |
| glycerol | 0.089 | 0.984 |
| cholesterol | 0.435 | 0.04 |
| AJ | 2.054 | 1.869 |
| Bibs02 | -0.86 | -0.338 |
| Bibs02c | 0.405 | -0.69 |
| BL6 | 1.231 | 1.43 |
| BL6a | 1.83 | 2.099 |
| BXD01 | 1.482 | 2.917 |
| BXD010 | 2.103 | 2.38 |
| BXD011 | 1.654 | 3.779 |
| BXD03 | 2.582 | 2.051 |
| BXD04 | 2.541 | 3.404 |
| BXD05 | 2.114 | 2.764 |
| BXD06 | 2.357 | 3.273 |
| BXD07 | 1.526 | 2.452 |
| BXD08 | 1.779 | 3.451 |
| BXD09 | 1.464 | 2.319 |
| CAST | 1.351 | 3.712 |
| CCcont | 2.094 | 0.288 |
| DS01 | 0.814 | -0.732 |
| DS02 | 0.603 | -1.182 |
| DS04 | 1.221 | 0.132 |
| DS0c | 1.216 | -0.757 |
| GP01 | -0.537 | -0.288 |
| GP02 | 1.062 | 0.034 |
| GP0c | -0.642 | 0.251 |
| NOD | 1.808 | 1.23 |
| NZO | 1.519 | 2.164 |
| PWK | 3.493 | 4.489 |
| H37Rv_KO_CtpC | -0.385 | 0.494 |
| H37Rv_KO_CtpD | 0.074 | 1.213 |
| H37Rv_KO_Rv1272 | 1.648 | 1.06 |
| H37Rv_KO_SugABC | 0.555 | 1.269 |
| H37Rv_KO_MbtN | 0.605 | 0.732 |
| Trans05 | 1.446 | 1.737 |
| macrophage_unactivated | -0.426 | -2.257 |
| IL1 | -1.883 | -1.0 |
| Rapamycin | -1.544 | -2.427 |
| Tcell | -0.544 | 0.596 |
| GMCSF | -0.943 | -0.694 |
| IFNab | -0.928 | -2.013 |
| IFNg | 0.182 | -1.505 |
| IFNg_GMCSF1 | 0.848 | -2.017 |
| Rv1432_day32 | 0.08 | 0.731 |
| Rv1565c_day32 | -0.218 | -1.311 |
| secA2_input | -0.229 | -0.377 |
| delta_Rv3594 | -0.714 | -0.234 |
| delta_Rv3717 | -0.904 | 0.766 |
| delta_Rv3811 | -0.998 | -1.084 |
| delta_Rv0954 | -1.974 | -0.596 |
| PonA1 | -1.813 | 0.792 |
| EccD1_KO | -0.332 | -0.72 |
| EspI_KO | -0.154 | -0.941 |
| PE35_KO | -0.239 | -0.998 |
| PPE68_KO | -0.262 | -0.893 |
| glycerol2 | -0.343 | -1.449 |
| lignocerate | 1.15 | -2.954 |
| oleate | -1.109 | -2.884 |
| phosphatidylcholine | 0.64 | -2.578 |
| acetate | 0.602 | -0.785 |
| glucAc | 0.61 | -1.674 |
| Rv0950ko | -0.256 | 1.447 |
| Rv1096ko | 0.0 | 0.072 |
| Rv3684ko | 0.059 | 1.601 |
| delta_otsA_trehalose | -0.945 | 0.147 |