Top 10 genes with highest correlation to Rv3278c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0055/rpsR1 | (cc=0.6948) | info on Rv0055/rpsR1 |
| Rv2430c/PPE41 | (cc=0.6406) | info on Rv2430c/PPE41 |
| Rv0805/- | (cc=0.6386) | info on Rv0805/- |
| Rv1072/- | (cc=0.6209) | info on Rv1072/- |
| Rv0371c/- | (cc=0.6117) | info on Rv0371c/- |
| Rv3142c/- | (cc=0.6095) | info on Rv3142c/- |
| Rv0668/rpoC | (cc=0.6074) | info on Rv0668/rpoC |
| Rv1239c/corA | (cc=0.5995) | info on Rv1239c/corA |
| Rv2793c/truB | (cc=0.5974) | info on Rv2793c/truB |
| Rv3421c/- | (cc=0.5842) | info on Rv3421c/- |
Correlation of Rv3278c/- with Rv0805/-
Normalized LFCs for Rv3278c/-:
(description and provenance of datasets)
| Rv3278c/- | Rv0805/- | |
| Fe_supp_jason_reseq | 1.468 | -0.609 |
| low_pH_jason_reseq | 0.462 | 2.615 |
| NO_jason_reseq | 0.307 | -3.686 |
| B6_jason_reseq | -0.034 | -1.743 |
| MHCII_jason_reseq | -0.278 | -3.887 |
| Isoniazid02 | 1.231 | 1.139 |
| Rifampicin4 | -0.417 | -2.534 |
| Ethambutol3 | -1.301 | -0.993 |
| Meropenem3 | 0.45 | -0.847 |
| Vancomycin16 | -0.117 | -0.034 |
| Rv2680_day32 | -0.947 | 1.826 |
| H37Rv_KO_MarP | -0.313 | -1.515 |
| hypoxia_3wks | -0.08 | -0.215 |
| hypoxia_6wks | -0.944 | -2.249 |
| glycerol | 0.089 | 1.701 |
| cholesterol | 0.435 | -0.676 |
| AJ | 2.054 | 2.04 |
| Bibs02 | -0.86 | -0.159 |
| Bibs02c | 0.405 | 1.082 |
| BL6 | 1.231 | 0.439 |
| BL6a | 1.83 | 3.122 |
| BXD01 | 1.482 | 6.0 |
| BXD010 | 2.103 | 3.308 |
| BXD011 | 1.654 | 2.293 |
| BXD03 | 2.582 | 3.901 |
| BXD04 | 2.541 | 5.495 |
| BXD05 | 2.114 | 2.33 |
| BXD06 | 2.357 | 4.573 |
| BXD07 | 1.526 | 3.297 |
| BXD08 | 1.779 | 2.623 |
| BXD09 | 1.464 | 3.807 |
| CAST | 1.351 | 1.468 |
| CCcont | 2.094 | 3.702 |
| DS01 | 0.814 | 2.962 |
| DS02 | 0.603 | 1.011 |
| DS04 | 1.221 | 0.5 |
| DS0c | 1.216 | 3.685 |
| GP01 | -0.537 | -0.946 |
| GP02 | 1.062 | -0.568 |
| GP0c | -0.642 | -1.245 |
| NOD | 1.808 | 0.983 |
| NZO | 1.519 | 2.932 |
| PWK | 3.493 | -0.261 |
| H37Rv_KO_CtpC | -0.385 | -0.758 |
| H37Rv_KO_CtpD | 0.074 | 1.382 |
| H37Rv_KO_Rv1272 | 1.648 | 0.454 |
| H37Rv_KO_SugABC | 0.555 | 0.041 |
| H37Rv_KO_MbtN | 0.605 | 0.809 |
| Trans05 | 1.446 | 1.482 |
| macrophage_unactivated | -0.426 | 0.884 |
| IL1 | -1.883 | -2.669 |
| Rapamycin | -1.544 | -0.5 |
| Tcell | -0.544 | -1.352 |
| GMCSF | -0.943 | -1.096 |
| IFNab | -0.928 | 0.302 |
| IFNg | 0.182 | -2.157 |
| IFNg_GMCSF1 | 0.848 | -1.524 |
| Rv1432_day32 | 0.08 | -1.036 |
| Rv1565c_day32 | -0.218 | -1.848 |
| secA2_input | -0.229 | -0.479 |
| delta_Rv3594 | -0.714 | -2.756 |
| delta_Rv3717 | -0.904 | -4.43 |
| delta_Rv3811 | -0.998 | -3.096 |
| delta_Rv0954 | -1.974 | -1.676 |
| PonA1 | -1.813 | -0.617 |
| EccD1_KO | -0.332 | -1.46 |
| EspI_KO | -0.154 | -1.155 |
| PE35_KO | -0.239 | 0.589 |
| PPE68_KO | -0.262 | -0.211 |
| glycerol2 | -0.343 | -0.916 |
| lignocerate | 1.15 | -0.23 |
| oleate | -1.109 | 1.015 |
| phosphatidylcholine | 0.64 | -1.752 |
| acetate | 0.602 | 0.121 |
| glucAc | 0.61 | -0.146 |
| Rv0950ko | -0.256 | 0.187 |
| Rv1096ko | 0.0 | -1.004 |
| Rv3684ko | 0.059 | -0.298 |
| delta_otsA_trehalose | -0.945 | 1.785 |