Top 10 genes with highest correlation to Rv3278c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0055/rpsR1 | (cc=0.6948) | info on Rv0055/rpsR1 |
| Rv2430c/PPE41 | (cc=0.6406) | info on Rv2430c/PPE41 |
| Rv0805/- | (cc=0.6386) | info on Rv0805/- |
| Rv1072/- | (cc=0.6209) | info on Rv1072/- |
| Rv0371c/- | (cc=0.6117) | info on Rv0371c/- |
| Rv3142c/- | (cc=0.6095) | info on Rv3142c/- |
| Rv0668/rpoC | (cc=0.6074) | info on Rv0668/rpoC |
| Rv1239c/corA | (cc=0.5995) | info on Rv1239c/corA |
| Rv2793c/truB | (cc=0.5974) | info on Rv2793c/truB |
| Rv3421c/- | (cc=0.5842) | info on Rv3421c/- |
Correlation of Rv3278c/- with Rv0055/rpsR1
Normalized LFCs for Rv3278c/-:
(description and provenance of datasets)
| Rv3278c/- | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | 1.468 | -1.37 |
| low_pH_jason_reseq | 0.462 | 3.369 |
| NO_jason_reseq | 0.307 | 2.57 |
| B6_jason_reseq | -0.034 | -0.657 |
| MHCII_jason_reseq | -0.278 | 1.143 |
| Isoniazid02 | 1.231 | 2.663 |
| Rifampicin4 | -0.417 | 0.902 |
| Ethambutol3 | -1.301 | -0.441 |
| Meropenem3 | 0.45 | 0.763 |
| Vancomycin16 | -0.117 | -0.294 |
| Rv2680_day32 | -0.947 | 0.109 |
| H37Rv_KO_MarP | -0.313 | -1.325 |
| hypoxia_3wks | -0.08 | -0.678 |
| hypoxia_6wks | -0.944 | 0.084 |
| glycerol | 0.089 | 0.97 |
| cholesterol | 0.435 | -0.276 |
| AJ | 2.054 | 0.983 |
| Bibs02 | -0.86 | 0.0 |
| Bibs02c | 0.405 | 0.336 |
| BL6 | 1.231 | 3.526 |
| BL6a | 1.83 | 3.297 |
| BXD01 | 1.482 | 5.013 |
| BXD010 | 2.103 | 4.197 |
| BXD011 | 1.654 | 5.786 |
| BXD03 | 2.582 | 3.889 |
| BXD04 | 2.541 | 6.0 |
| BXD05 | 2.114 | 4.896 |
| BXD06 | 2.357 | 4.527 |
| BXD07 | 1.526 | 4.203 |
| BXD08 | 1.779 | 5.838 |
| BXD09 | 1.464 | 4.442 |
| CAST | 1.351 | 3.287 |
| CCcont | 2.094 | 3.633 |
| DS01 | 0.814 | 1.381 |
| DS02 | 0.603 | 0.181 |
| DS04 | 1.221 | -0.177 |
| DS0c | 1.216 | 0.0 |
| GP01 | -0.537 | -0.188 |
| GP02 | 1.062 | 0.0 |
| GP0c | -0.642 | -0.248 |
| NOD | 1.808 | 3.817 |
| NZO | 1.519 | -0.182 |
| PWK | 3.493 | 3.083 |
| H37Rv_KO_CtpC | -0.385 | 1.611 |
| H37Rv_KO_CtpD | 0.074 | 1.594 |
| H37Rv_KO_Rv1272 | 1.648 | 2.661 |
| H37Rv_KO_SugABC | 0.555 | -0.189 |
| H37Rv_KO_MbtN | 0.605 | 1.153 |
| Trans05 | 1.446 | 3.074 |
| macrophage_unactivated | -0.426 | 0.0 |
| IL1 | -1.883 | -0.54 |
| Rapamycin | -1.544 | -0.077 |
| Tcell | -0.544 | 1.717 |
| GMCSF | -0.943 | -1.677 |
| IFNab | -0.928 | -0.076 |
| IFNg | 0.182 | -1.31 |
| IFNg_GMCSF1 | 0.848 | -2.916 |
| Rv1432_day32 | 0.08 | 0.0 |
| Rv1565c_day32 | -0.218 | -0.415 |
| secA2_input | -0.229 | 0.997 |
| delta_Rv3594 | -0.714 | -0.812 |
| delta_Rv3717 | -0.904 | -4.252 |
| delta_Rv3811 | -0.998 | -0.106 |
| delta_Rv0954 | -1.974 | -4.366 |
| PonA1 | -1.813 | -1.721 |
| EccD1_KO | -0.332 | -2.578 |
| EspI_KO | -0.154 | 0.0 |
| PE35_KO | -0.239 | 0.134 |
| PPE68_KO | -0.262 | 0.941 |
| glycerol2 | -0.343 | 2.948 |
| lignocerate | 1.15 | 3.955 |
| oleate | -1.109 | -1.418 |
| phosphatidylcholine | 0.64 | 3.751 |
| acetate | 0.602 | 4.357 |
| glucAc | 0.61 | 3.813 |
| Rv0950ko | -0.256 | -0.944 |
| Rv1096ko | 0.0 | -1.08 |
| Rv3684ko | 0.059 | 2.391 |
| delta_otsA_trehalose | -0.945 | 0.0 |