Top 10 genes with highest correlation to Rv3167c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1290A/- | (cc=0.522) | info on Rv1290A/- |
| Rv2625c/- | (cc=0.5004) | info on Rv2625c/- |
| Rv0570/nrdZ | (cc=0.4912) | info on Rv0570/nrdZ |
| Rv1180/pks3 | (cc=0.4878) | info on Rv1180/pks3 |
| Rv2515c/- | (cc=0.4868) | info on Rv2515c/- |
| Rv0850/- | (cc=0.4843) | info on Rv0850/- |
| Rv2028c/- | (cc=0.4803) | info on Rv2028c/- |
| Rv0758/phoR | (cc=0.4794) | info on Rv0758/phoR |
| Rv1052/- | (cc=0.4695) | info on Rv1052/- |
| Rv3062/ligB | (cc=0.4623) | info on Rv3062/ligB |
Correlation of Rv3167c/- with Rv3062/ligB
Normalized LFCs for Rv3167c/-:
(description and provenance of datasets)
| Rv3167c/- | Rv3062/ligB | |
| Fe_supp_jason_reseq | -0.118 | -0.802 |
| low_pH_jason_reseq | 2.17 | 0.564 |
| NO_jason_reseq | 0.307 | 0.095 |
| B6_jason_reseq | 0.812 | 0.82 |
| MHCII_jason_reseq | -0.205 | 0.271 |
| Isoniazid02 | -0.805 | 0.335 |
| Rifampicin4 | -0.785 | 0.742 |
| Ethambutol3 | -0.294 | 1.569 |
| Meropenem3 | -0.272 | 0.392 |
| Vancomycin16 | -0.366 | 0.783 |
| Rv2680_day32 | 0.912 | 0.986 |
| H37Rv_KO_MarP | -0.497 | 0.899 |
| hypoxia_3wks | 0.55 | 0.415 |
| hypoxia_6wks | 0.791 | 0.455 |
| glycerol | -0.958 | 0.246 |
| cholesterol | -1.104 | -0.068 |
| AJ | 0.218 | -0.624 |
| Bibs02 | -0.069 | 0.046 |
| Bibs02c | 0.076 | -0.203 |
| BL6 | 0.661 | -1.337 |
| BL6a | -0.024 | -1.158 |
| BXD01 | -0.618 | -0.209 |
| BXD010 | -0.032 | -1.165 |
| BXD011 | -1.387 | -1.362 |
| BXD03 | -0.899 | -1.281 |
| BXD04 | -1.69 | 0.025 |
| BXD05 | -1.06 | -1.01 |
| BXD06 | -1.087 | -0.855 |
| BXD07 | 0.177 | -0.372 |
| BXD08 | -0.915 | -1.277 |
| BXD09 | -1.001 | -1.115 |
| CAST | 0.028 | -0.499 |
| CCcont | -0.326 | -1.287 |
| DS01 | -0.7 | -0.087 |
| DS02 | -0.989 | 0.473 |
| DS04 | -0.048 | -0.561 |
| DS0c | -1.204 | 0.57 |
| GP01 | -1.349 | -1.757 |
| GP02 | -1.064 | -0.99 |
| GP0c | -0.032 | -1.506 |
| NOD | -0.456 | -0.348 |
| NZO | -1.624 | -0.309 |
| PWK | 0.024 | -0.328 |
| H37Rv_KO_CtpC | -1.238 | -0.965 |
| H37Rv_KO_CtpD | -2.21 | -1.829 |
| H37Rv_KO_Rv1272 | -1.691 | -1.898 |
| H37Rv_KO_SugABC | 0.588 | -0.266 |
| H37Rv_KO_MbtN | 0.153 | -1.194 |
| Trans05 | -1.334 | -0.478 |
| macrophage_unactivated | -1.092 | -0.436 |
| IL1 | -0.816 | -0.148 |
| Rapamycin | 0.396 | -0.479 |
| Tcell | -1.29 | 0.261 |
| GMCSF | -1.046 | -1.154 |
| IFNab | -1.433 | -1.388 |
| IFNg | -1.339 | -1.35 |
| IFNg_GMCSF1 | -0.864 | 0.201 |
| Rv1432_day32 | -0.92 | 1.035 |
| Rv1565c_day32 | -0.411 | 0.589 |
| secA2_input | -1.263 | -0.279 |
| delta_Rv3594 | -0.046 | 0.078 |
| delta_Rv3717 | 0.405 | -0.17 |
| delta_Rv3811 | -0.138 | -1.071 |
| delta_Rv0954 | -0.039 | -0.034 |
| PonA1 | 0.035 | -0.205 |
| EccD1_KO | 0.454 | 1.072 |
| EspI_KO | 0.394 | -0.268 |
| PE35_KO | 1.105 | -0.108 |
| PPE68_KO | 1.12 | 0.173 |
| glycerol2 | 0.521 | 0.231 |
| lignocerate | 0.343 | 0.309 |
| oleate | 0.761 | 0.432 |
| phosphatidylcholine | 0.779 | 0.473 |
| acetate | 0.924 | -0.253 |
| glucAc | 0.493 | -0.193 |
| Rv0950ko | 1.414 | 1.288 |
| Rv1096ko | 1.873 | 1.927 |
| Rv3684ko | 0.57 | 1.569 |
| delta_otsA_trehalose | -1.68 | -0.11 |