Top 10 genes with highest correlation to Rv3167c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1290A/- | (cc=0.522) | info on Rv1290A/- |
| Rv2625c/- | (cc=0.5004) | info on Rv2625c/- |
| Rv0570/nrdZ | (cc=0.4912) | info on Rv0570/nrdZ |
| Rv1180/pks3 | (cc=0.4878) | info on Rv1180/pks3 |
| Rv2515c/- | (cc=0.4868) | info on Rv2515c/- |
| Rv0850/- | (cc=0.4843) | info on Rv0850/- |
| Rv2028c/- | (cc=0.4803) | info on Rv2028c/- |
| Rv0758/phoR | (cc=0.4794) | info on Rv0758/phoR |
| Rv1052/- | (cc=0.4695) | info on Rv1052/- |
| Rv3062/ligB | (cc=0.4623) | info on Rv3062/ligB |
Correlation of Rv3167c/- with Rv2028c/-
Normalized LFCs for Rv3167c/-:
(description and provenance of datasets)
| Rv3167c/- | Rv2028c/- | |
| Fe_supp_jason_reseq | -0.118 | -0.545 |
| low_pH_jason_reseq | 2.17 | 0.125 |
| NO_jason_reseq | 0.307 | 0.383 |
| B6_jason_reseq | 0.812 | 1.559 |
| MHCII_jason_reseq | -0.205 | 0.332 |
| Isoniazid02 | -0.805 | 0.201 |
| Rifampicin4 | -0.785 | -0.16 |
| Ethambutol3 | -0.294 | 2.402 |
| Meropenem3 | -0.272 | 0.701 |
| Vancomycin16 | -0.366 | -0.488 |
| Rv2680_day32 | 0.912 | 1.364 |
| H37Rv_KO_MarP | -0.497 | 0.023 |
| hypoxia_3wks | 0.55 | -0.794 |
| hypoxia_6wks | 0.791 | -0.896 |
| glycerol | -0.958 | 0.038 |
| cholesterol | -1.104 | -0.641 |
| AJ | 0.218 | -0.232 |
| Bibs02 | -0.069 | -0.531 |
| Bibs02c | 0.076 | -0.08 |
| BL6 | 0.661 | -1.159 |
| BL6a | -0.024 | -0.575 |
| BXD01 | -0.618 | -2.872 |
| BXD010 | -0.032 | -2.824 |
| BXD011 | -1.387 | -1.303 |
| BXD03 | -0.899 | -1.716 |
| BXD04 | -1.69 | -0.888 |
| BXD05 | -1.06 | -0.984 |
| BXD06 | -1.087 | -1.876 |
| BXD07 | 0.177 | -2.203 |
| BXD08 | -0.915 | -2.416 |
| BXD09 | -1.001 | -1.302 |
| CAST | 0.028 | -0.15 |
| CCcont | -0.326 | -1.338 |
| DS01 | -0.7 | 0.282 |
| DS02 | -0.989 | 0.643 |
| DS04 | -0.048 | -0.025 |
| DS0c | -1.204 | -0.041 |
| GP01 | -1.349 | 0.383 |
| GP02 | -1.064 | -1.4 |
| GP0c | -0.032 | -0.445 |
| NOD | -0.456 | -0.524 |
| NZO | -1.624 | 0.238 |
| PWK | 0.024 | -1.131 |
| H37Rv_KO_CtpC | -1.238 | -1.775 |
| H37Rv_KO_CtpD | -2.21 | -2.301 |
| H37Rv_KO_Rv1272 | -1.691 | -1.731 |
| H37Rv_KO_SugABC | 0.588 | -0.478 |
| H37Rv_KO_MbtN | 0.153 | 0.169 |
| Trans05 | -1.334 | -0.346 |
| macrophage_unactivated | -1.092 | -0.401 |
| IL1 | -0.816 | -1.181 |
| Rapamycin | 0.396 | -0.448 |
| Tcell | -1.29 | -2.108 |
| GMCSF | -1.046 | -0.65 |
| IFNab | -1.433 | -0.327 |
| IFNg | -1.339 | -0.241 |
| IFNg_GMCSF1 | -0.864 | -0.971 |
| Rv1432_day32 | -0.92 | -0.042 |
| Rv1565c_day32 | -0.411 | 0.043 |
| secA2_input | -1.263 | -1.603 |
| delta_Rv3594 | -0.046 | 0.251 |
| delta_Rv3717 | 0.405 | 0.842 |
| delta_Rv3811 | -0.138 | 0.929 |
| delta_Rv0954 | -0.039 | 0.703 |
| PonA1 | 0.035 | 0.208 |
| EccD1_KO | 0.454 | 0.98 |
| EspI_KO | 0.394 | 1.32 |
| PE35_KO | 1.105 | 0.222 |
| PPE68_KO | 1.12 | 0.694 |
| glycerol2 | 0.521 | 0.581 |
| lignocerate | 0.343 | 0.462 |
| oleate | 0.761 | -0.292 |
| phosphatidylcholine | 0.779 | 0.193 |
| acetate | 0.924 | 1.026 |
| glucAc | 0.493 | 0.572 |
| Rv0950ko | 1.414 | 1.544 |
| Rv1096ko | 1.873 | 0.875 |
| Rv3684ko | 0.57 | 0.95 |
| delta_otsA_trehalose | -1.68 | -0.438 |