Top 10 genes with highest correlation to Rv3167c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1290A/- | (cc=0.522) | info on Rv1290A/- |
| Rv2625c/- | (cc=0.5004) | info on Rv2625c/- |
| Rv0570/nrdZ | (cc=0.4912) | info on Rv0570/nrdZ |
| Rv1180/pks3 | (cc=0.4878) | info on Rv1180/pks3 |
| Rv2515c/- | (cc=0.4868) | info on Rv2515c/- |
| Rv0850/- | (cc=0.4843) | info on Rv0850/- |
| Rv2028c/- | (cc=0.4803) | info on Rv2028c/- |
| Rv0758/phoR | (cc=0.4794) | info on Rv0758/phoR |
| Rv1052/- | (cc=0.4695) | info on Rv1052/- |
| Rv3062/ligB | (cc=0.4623) | info on Rv3062/ligB |
Correlation of Rv3167c/- with Rv0570/nrdZ
Normalized LFCs for Rv3167c/-:
(description and provenance of datasets)
| Rv3167c/- | Rv0570/nrdZ | |
| Fe_supp_jason_reseq | -0.118 | 0.022 |
| low_pH_jason_reseq | 2.17 | 0.694 |
| NO_jason_reseq | 0.307 | 0.599 |
| B6_jason_reseq | 0.812 | 0.881 |
| MHCII_jason_reseq | -0.205 | 1.017 |
| Isoniazid02 | -0.805 | -0.597 |
| Rifampicin4 | -0.785 | 0.217 |
| Ethambutol3 | -0.294 | -0.499 |
| Meropenem3 | -0.272 | -1.562 |
| Vancomycin16 | -0.366 | -0.756 |
| Rv2680_day32 | 0.912 | 0.579 |
| H37Rv_KO_MarP | -0.497 | 0.155 |
| hypoxia_3wks | 0.55 | -0.778 |
| hypoxia_6wks | 0.791 | 0.0 |
| glycerol | -0.958 | -0.424 |
| cholesterol | -1.104 | -0.813 |
| AJ | 0.218 | -0.565 |
| Bibs02 | -0.069 | 0.441 |
| Bibs02c | 0.076 | -0.321 |
| BL6 | 0.661 | -0.079 |
| BL6a | -0.024 | -0.874 |
| BXD01 | -0.618 | -0.615 |
| BXD010 | -0.032 | -1.262 |
| BXD011 | -1.387 | -0.994 |
| BXD03 | -0.899 | -0.364 |
| BXD04 | -1.69 | -0.666 |
| BXD05 | -1.06 | -0.027 |
| BXD06 | -1.087 | -0.616 |
| BXD07 | 0.177 | -0.582 |
| BXD08 | -0.915 | -0.533 |
| BXD09 | -1.001 | -0.741 |
| CAST | 0.028 | -0.112 |
| CCcont | -0.326 | -0.612 |
| DS01 | -0.7 | 0.048 |
| DS02 | -0.989 | 0.17 |
| DS04 | -0.048 | 0.58 |
| DS0c | -1.204 | 0.264 |
| GP01 | -1.349 | -0.543 |
| GP02 | -1.064 | -0.239 |
| GP0c | -0.032 | -0.508 |
| NOD | -0.456 | -0.666 |
| NZO | -1.624 | -0.608 |
| PWK | 0.024 | 0.117 |
| H37Rv_KO_CtpC | -1.238 | -0.249 |
| H37Rv_KO_CtpD | -2.21 | -0.572 |
| H37Rv_KO_Rv1272 | -1.691 | -1.294 |
| H37Rv_KO_SugABC | 0.588 | -0.942 |
| H37Rv_KO_MbtN | 0.153 | 0.18 |
| Trans05 | -1.334 | 0.35 |
| macrophage_unactivated | -1.092 | -0.789 |
| IL1 | -0.816 | -0.567 |
| Rapamycin | 0.396 | -0.411 |
| Tcell | -1.29 | -0.622 |
| GMCSF | -1.046 | -0.504 |
| IFNab | -1.433 | -0.157 |
| IFNg | -1.339 | -0.104 |
| IFNg_GMCSF1 | -0.864 | 0.531 |
| Rv1432_day32 | -0.92 | -0.218 |
| Rv1565c_day32 | -0.411 | 0.785 |
| secA2_input | -1.263 | 0.432 |
| delta_Rv3594 | -0.046 | 0.581 |
| delta_Rv3717 | 0.405 | 0.38 |
| delta_Rv3811 | -0.138 | 0.402 |
| delta_Rv0954 | -0.039 | 0.194 |
| PonA1 | 0.035 | -0.046 |
| EccD1_KO | 0.454 | 0.553 |
| EspI_KO | 0.394 | 0.051 |
| PE35_KO | 1.105 | 0.58 |
| PPE68_KO | 1.12 | 0.589 |
| glycerol2 | 0.521 | 1.04 |
| lignocerate | 0.343 | 1.727 |
| oleate | 0.761 | 0.245 |
| phosphatidylcholine | 0.779 | 1.147 |
| acetate | 0.924 | 1.072 |
| glucAc | 0.493 | 1.2 |
| Rv0950ko | 1.414 | 0.41 |
| Rv1096ko | 1.873 | 0.648 |
| Rv3684ko | 0.57 | 0.55 |
| delta_otsA_trehalose | -1.68 | 0.023 |