Top 10 genes with highest correlation to Rv3057c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2989/- | (cc=0.7509) | info on Rv2989/- |
| Rv3197/- | (cc=0.7309) | info on Rv3197/- |
| Rv1493/mutB | (cc=0.6626) | info on Rv1493/mutB |
| Rv0391/metZ | (cc=0.6608) | info on Rv0391/metZ |
| Rv0485/- | (cc=0.6585) | info on Rv0485/- |
| Rv1405c/- | (cc=0.6503) | info on Rv1405c/- |
| Rv3551/- | (cc=0.6482) | info on Rv3551/- |
| Rv3616c/espA | (cc=0.6441) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.6423) | info on Rv3870/eccCa1 |
| Rv2605c/tesB2 | (cc=0.6409) | info on Rv2605c/tesB2 |
Correlation of Rv3057c/- with Rv3870/eccCa1
Normalized LFCs for Rv3057c/-:
(description and provenance of datasets)
| Rv3057c/- | Rv3870/eccCa1 | |
| Fe_supp_jason_reseq | -0.59 | -1.088 |
| low_pH_jason_reseq | -0.609 | 0.325 |
| NO_jason_reseq | -0.84 | -0.291 |
| B6_jason_reseq | -2.072 | -2.875 |
| MHCII_jason_reseq | -1.985 | -3.014 |
| Isoniazid02 | -0.333 | -0.306 |
| Rifampicin4 | -0.084 | -0.888 |
| Ethambutol3 | -0.285 | -0.131 |
| Meropenem3 | 0.713 | 0.261 |
| Vancomycin16 | 1.724 | -0.215 |
| Rv2680_day32 | -2.261 | -1.924 |
| H37Rv_KO_MarP | 0.047 | 1.534 |
| hypoxia_3wks | -0.542 | -0.152 |
| hypoxia_6wks | -0.716 | 0.142 |
| glycerol | -1.164 | -0.78 |
| cholesterol | -0.547 | -0.197 |
| AJ | -2.245 | -5.284 |
| Bibs02 | -1.888 | -5.766 |
| Bibs02c | -2.123 | -4.15 |
| BL6 | -1.134 | -1.616 |
| BL6a | -2.414 | -4.402 |
| BXD01 | -2.872 | -3.251 |
| BXD010 | -1.1 | -2.846 |
| BXD011 | -2.12 | -2.901 |
| BXD03 | -1.068 | -2.571 |
| BXD04 | -2.004 | -2.748 |
| BXD05 | -1.993 | -2.789 |
| BXD06 | -2.135 | -3.586 |
| BXD07 | -1.915 | -2.661 |
| BXD08 | -2.02 | -3.816 |
| BXD09 | -2.19 | -3.836 |
| CAST | -1.775 | -4.883 |
| CCcont | -0.965 | -0.407 |
| DS01 | -3.037 | -4.356 |
| DS02 | -2.511 | -4.052 |
| DS04 | -2.965 | -2.155 |
| DS0c | -2.362 | -4.302 |
| GP01 | -1.134 | -2.367 |
| GP02 | -1.13 | -2.347 |
| GP0c | -1.131 | -0.842 |
| NOD | -1.03 | -1.925 |
| NZO | -2.25 | -5.444 |
| PWK | -1.071 | -5.533 |
| H37Rv_KO_CtpC | 0.224 | -1.66 |
| H37Rv_KO_CtpD | -0.668 | -1.651 |
| H37Rv_KO_Rv1272 | -1.491 | -1.806 |
| H37Rv_KO_SugABC | -2.062 | -0.647 |
| H37Rv_KO_MbtN | -1.317 | 0.049 |
| Trans05 | -2.483 | -1.38 |
| macrophage_unactivated | -0.571 | -0.262 |
| IL1 | 0.228 | -0.246 |
| Rapamycin | 0.285 | -0.288 |
| Tcell | 0.476 | -1.541 |
| GMCSF | 0.372 | 0.681 |
| IFNab | 0.218 | 1.859 |
| IFNg | 0.417 | -1.497 |
| IFNg_GMCSF1 | 0.459 | -1.313 |
| Rv1432_day32 | -3.233 | -2.52 |
| Rv1565c_day32 | 0.049 | -2.663 |
| secA2_input | -0.014 | 0.036 |
| delta_Rv3594 | -2.074 | 0.106 |
| delta_Rv3717 | -3.053 | -0.101 |
| delta_Rv3811 | -1.991 | -0.233 |
| delta_Rv0954 | 0.77 | 0.379 |
| PonA1 | 0.555 | 0.384 |
| EccD1_KO | 0.888 | 0.342 |
| EspI_KO | 0.844 | 0.633 |
| PE35_KO | 0.149 | 0.257 |
| PPE68_KO | 0.506 | 0.214 |
| glycerol2 | 0.914 | 0.423 |
| lignocerate | -0.96 | 0.792 |
| oleate | -1.733 | -0.193 |
| phosphatidylcholine | -0.978 | 0.531 |
| acetate | 0.382 | 0.095 |
| glucAc | 0.303 | 0.366 |
| Rv0950ko | -0.292 | 0.356 |
| Rv1096ko | 0.558 | -0.229 |
| Rv3684ko | -0.626 | 0.37 |
| delta_otsA_trehalose | -0.35 | -0.994 |