Top 10 genes with highest correlation to Rv3057c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2989/- | (cc=0.7509) | info on Rv2989/- |
| Rv3197/- | (cc=0.7309) | info on Rv3197/- |
| Rv1493/mutB | (cc=0.6626) | info on Rv1493/mutB |
| Rv0391/metZ | (cc=0.6608) | info on Rv0391/metZ |
| Rv0485/- | (cc=0.6585) | info on Rv0485/- |
| Rv1405c/- | (cc=0.6503) | info on Rv1405c/- |
| Rv3551/- | (cc=0.6482) | info on Rv3551/- |
| Rv3616c/espA | (cc=0.6441) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.6423) | info on Rv3870/eccCa1 |
| Rv2605c/tesB2 | (cc=0.6409) | info on Rv2605c/tesB2 |
Correlation of Rv3057c/- with Rv0391/metZ
Normalized LFCs for Rv3057c/-:
(description and provenance of datasets)
| Rv3057c/- | Rv0391/metZ | |
| Fe_supp_jason_reseq | -0.59 | -1.075 |
| low_pH_jason_reseq | -0.609 | -0.35 |
| NO_jason_reseq | -0.84 | -0.265 |
| B6_jason_reseq | -2.072 | -2.065 |
| MHCII_jason_reseq | -1.985 | -2.712 |
| Isoniazid02 | -0.333 | -1.052 |
| Rifampicin4 | -0.084 | 0.36 |
| Ethambutol3 | -0.285 | -1.009 |
| Meropenem3 | 0.713 | -1.689 |
| Vancomycin16 | 1.724 | -0.512 |
| Rv2680_day32 | -2.261 | -3.196 |
| H37Rv_KO_MarP | 0.047 | -0.334 |
| hypoxia_3wks | -0.542 | -1.918 |
| hypoxia_6wks | -0.716 | -1.075 |
| glycerol | -1.164 | -3.065 |
| cholesterol | -0.547 | -4.165 |
| AJ | -2.245 | -1.814 |
| Bibs02 | -1.888 | -2.42 |
| Bibs02c | -2.123 | -2.986 |
| BL6 | -1.134 | -1.898 |
| BL6a | -2.414 | -3.204 |
| BXD01 | -2.872 | -2.411 |
| BXD010 | -1.1 | -1.463 |
| BXD011 | -2.12 | -2.741 |
| BXD03 | -1.068 | -1.376 |
| BXD04 | -2.004 | -2.067 |
| BXD05 | -1.993 | -1.781 |
| BXD06 | -2.135 | -2.268 |
| BXD07 | -1.915 | -2.809 |
| BXD08 | -2.02 | -1.498 |
| BXD09 | -2.19 | -2.555 |
| CAST | -1.775 | -2.75 |
| CCcont | -0.965 | -1.498 |
| DS01 | -3.037 | -2.236 |
| DS02 | -2.511 | -2.379 |
| DS04 | -2.965 | -2.645 |
| DS0c | -2.362 | -2.145 |
| GP01 | -1.134 | -0.581 |
| GP02 | -1.13 | -0.884 |
| GP0c | -1.131 | -1.304 |
| NOD | -1.03 | -0.155 |
| NZO | -2.25 | -2.719 |
| PWK | -1.071 | -2.674 |
| H37Rv_KO_CtpC | 0.224 | -1.27 |
| H37Rv_KO_CtpD | -0.668 | -1.953 |
| H37Rv_KO_Rv1272 | -1.491 | -2.755 |
| H37Rv_KO_SugABC | -2.062 | -0.382 |
| H37Rv_KO_MbtN | -1.317 | -1.286 |
| Trans05 | -2.483 | -2.701 |
| macrophage_unactivated | -0.571 | -0.243 |
| IL1 | 0.228 | 1.305 |
| Rapamycin | 0.285 | -0.488 |
| Tcell | 0.476 | 1.698 |
| GMCSF | 0.372 | -1.064 |
| IFNab | 0.218 | -0.523 |
| IFNg | 0.417 | 0.099 |
| IFNg_GMCSF1 | 0.459 | -1.062 |
| Rv1432_day32 | -3.233 | -3.707 |
| Rv1565c_day32 | 0.049 | -2.504 |
| secA2_input | -0.014 | 0.307 |
| delta_Rv3594 | -2.074 | -1.055 |
| delta_Rv3717 | -3.053 | -1.128 |
| delta_Rv3811 | -1.991 | -1.268 |
| delta_Rv0954 | 0.77 | -0.491 |
| PonA1 | 0.555 | 0.465 |
| EccD1_KO | 0.888 | 0.0 |
| EspI_KO | 0.844 | -0.588 |
| PE35_KO | 0.149 | -0.715 |
| PPE68_KO | 0.506 | -0.221 |
| glycerol2 | 0.914 | 0.422 |
| lignocerate | -0.96 | -0.044 |
| oleate | -1.733 | -0.129 |
| phosphatidylcholine | -0.978 | -0.076 |
| acetate | 0.382 | -0.09 |
| glucAc | 0.303 | -0.623 |
| Rv0950ko | -0.292 | 0.157 |
| Rv1096ko | 0.558 | 0.422 |
| Rv3684ko | -0.626 | -0.458 |
| delta_otsA_trehalose | -0.35 | 0.161 |