Top 10 genes with highest correlation to Rv3057c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2989/- | (cc=0.7509) | info on Rv2989/- |
| Rv3197/- | (cc=0.7309) | info on Rv3197/- |
| Rv1493/mutB | (cc=0.6626) | info on Rv1493/mutB |
| Rv0391/metZ | (cc=0.6608) | info on Rv0391/metZ |
| Rv0485/- | (cc=0.6585) | info on Rv0485/- |
| Rv1405c/- | (cc=0.6503) | info on Rv1405c/- |
| Rv3551/- | (cc=0.6482) | info on Rv3551/- |
| Rv3616c/espA | (cc=0.6441) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.6423) | info on Rv3870/eccCa1 |
| Rv2605c/tesB2 | (cc=0.6409) | info on Rv2605c/tesB2 |
Correlation of Rv3057c/- with Rv2989/-
Normalized LFCs for Rv3057c/-:
(description and provenance of datasets)
| Rv3057c/- | Rv2989/- | |
| Fe_supp_jason_reseq | -0.59 | 3.044 |
| low_pH_jason_reseq | -0.609 | -1.673 |
| NO_jason_reseq | -0.84 | -3.071 |
| B6_jason_reseq | -2.072 | -1.298 |
| MHCII_jason_reseq | -1.985 | -1.806 |
| Isoniazid02 | -0.333 | -1.534 |
| Rifampicin4 | -0.084 | 0.141 |
| Ethambutol3 | -0.285 | 2.022 |
| Meropenem3 | 0.713 | 0.902 |
| Vancomycin16 | 1.724 | 0.65 |
| Rv2680_day32 | -2.261 | -2.939 |
| H37Rv_KO_MarP | 0.047 | -1.521 |
| hypoxia_3wks | -0.542 | -2.054 |
| hypoxia_6wks | -0.716 | -2.76 |
| glycerol | -1.164 | -3.397 |
| cholesterol | -0.547 | -3.158 |
| AJ | -2.245 | -4.686 |
| Bibs02 | -1.888 | -1.534 |
| Bibs02c | -2.123 | -3.675 |
| BL6 | -1.134 | -3.258 |
| BL6a | -2.414 | -4.84 |
| BXD01 | -2.872 | -3.64 |
| BXD010 | -1.1 | -3.579 |
| BXD011 | -2.12 | -3.56 |
| BXD03 | -1.068 | -3.779 |
| BXD04 | -2.004 | -3.456 |
| BXD05 | -1.993 | -3.761 |
| BXD06 | -2.135 | -3.597 |
| BXD07 | -1.915 | -3.87 |
| BXD08 | -2.02 | -3.717 |
| BXD09 | -2.19 | -3.927 |
| CAST | -1.775 | -3.714 |
| CCcont | -0.965 | -2.131 |
| DS01 | -3.037 | -3.179 |
| DS02 | -2.511 | -3.044 |
| DS04 | -2.965 | -3.733 |
| DS0c | -2.362 | -4.173 |
| GP01 | -1.134 | -2.759 |
| GP02 | -1.13 | -2.325 |
| GP0c | -1.131 | -3.634 |
| NOD | -1.03 | -3.023 |
| NZO | -2.25 | -4.13 |
| PWK | -1.071 | -2.914 |
| H37Rv_KO_CtpC | 0.224 | -0.035 |
| H37Rv_KO_CtpD | -0.668 | 0.587 |
| H37Rv_KO_Rv1272 | -1.491 | -3.941 |
| H37Rv_KO_SugABC | -2.062 | -2.349 |
| H37Rv_KO_MbtN | -1.317 | -1.734 |
| Trans05 | -2.483 | -3.652 |
| macrophage_unactivated | -0.571 | -0.259 |
| IL1 | 0.228 | 1.32 |
| Rapamycin | 0.285 | 0.577 |
| Tcell | 0.476 | 3.812 |
| GMCSF | 0.372 | -0.57 |
| IFNab | 0.218 | -0.381 |
| IFNg | 0.417 | 0.0 |
| IFNg_GMCSF1 | 0.459 | -1.474 |
| Rv1432_day32 | -3.233 | -4.963 |
| Rv1565c_day32 | 0.049 | -0.599 |
| secA2_input | -0.014 | 0.266 |
| delta_Rv3594 | -2.074 | -2.857 |
| delta_Rv3717 | -3.053 | -3.132 |
| delta_Rv3811 | -1.991 | -2.134 |
| delta_Rv0954 | 0.77 | -1.168 |
| PonA1 | 0.555 | 0.023 |
| EccD1_KO | 0.888 | 0.589 |
| EspI_KO | 0.844 | -0.673 |
| PE35_KO | 0.149 | 0.726 |
| PPE68_KO | 0.506 | -0.086 |
| glycerol2 | 0.914 | -1.749 |
| lignocerate | -0.96 | -2.177 |
| oleate | -1.733 | -2.535 |
| phosphatidylcholine | -0.978 | -0.766 |
| acetate | 0.382 | 0.296 |
| glucAc | 0.303 | 0.578 |
| Rv0950ko | -0.292 | 0.425 |
| Rv1096ko | 0.558 | -1.252 |
| Rv3684ko | -0.626 | -1.847 |
| delta_otsA_trehalose | -0.35 | -3.01 |