Top 10 genes with highest correlation to Rv2939/papA5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2940c/mas | (cc=0.9766) | info on Rv2940c/mas |
| Rv2930/fadD26 | (cc=0.9697) | info on Rv2930/fadD26 |
| Rv2932/ppsB | (cc=0.9649) | info on Rv2932/ppsB |
| Rv2933/ppsC | (cc=0.9628) | info on Rv2933/ppsC |
| Rv2931/ppsA | (cc=0.9626) | info on Rv2931/ppsA |
| Rv2941/fadD28 | (cc=0.9609) | info on Rv2941/fadD28 |
| Rv2934/ppsD | (cc=0.9543) | info on Rv2934/ppsD |
| Rv2935/ppsE | (cc=0.9442) | info on Rv2935/ppsE |
| Rv2928/tesA | (cc=0.6935) | info on Rv2928/tesA |
| Rv1472/echA12 | (cc=0.5571) | info on Rv1472/echA12 |
Correlation of Rv2939/papA5 with Rv2931/ppsA
Normalized LFCs for Rv2939/papA5:
(description and provenance of datasets)
| Rv2939/papA5 | Rv2931/ppsA | |
| Fe_supp_jason_reseq | 1.588 | 2.073 |
| low_pH_jason_reseq | 1.822 | 2.476 |
| NO_jason_reseq | -0.42 | -0.441 |
| B6_jason_reseq | 0.953 | 1.807 |
| MHCII_jason_reseq | -3.495 | -2.823 |
| Isoniazid02 | 0.274 | 0.295 |
| Rifampicin4 | 0.753 | 0.888 |
| Ethambutol3 | 0.378 | 0.116 |
| Meropenem3 | 0.579 | 0.49 |
| Vancomycin16 | 0.143 | -0.122 |
| Rv2680_day32 | -2.003 | -2.214 |
| H37Rv_KO_MarP | 0.09 | -0.559 |
| hypoxia_3wks | 0.239 | 0.985 |
| hypoxia_6wks | -0.716 | -0.171 |
| glycerol | 2.5 | 3.229 |
| cholesterol | 2.136 | 2.197 |
| AJ | 0.617 | 0.304 |
| Bibs02 | -3.694 | -3.444 |
| Bibs02c | -3.575 | -3.146 |
| BL6 | 0.191 | 0.604 |
| BL6a | -0.918 | -0.994 |
| BXD01 | 1.501 | 1.763 |
| BXD010 | 0.097 | 0.318 |
| BXD011 | -0.375 | -0.042 |
| BXD03 | 0.135 | -0.044 |
| BXD04 | 1.46 | 1.017 |
| BXD05 | -0.769 | -0.96 |
| BXD06 | 0.126 | 0.213 |
| BXD07 | 0.018 | 0.367 |
| BXD08 | 0.678 | 1.493 |
| BXD09 | 0.054 | -0.321 |
| CAST | 3.04 | 2.346 |
| CCcont | 1.053 | 1.122 |
| DS01 | 0.453 | 0.287 |
| DS02 | 0.945 | 0.833 |
| DS04 | 0.013 | 0.142 |
| DS0c | 0.112 | -0.553 |
| GP01 | -2.855 | -2.345 |
| GP02 | -2.322 | -1.976 |
| GP0c | -3.511 | -3.087 |
| NOD | 2.177 | 1.687 |
| NZO | 2.196 | 2.15 |
| PWK | 0.064 | -0.131 |
| H37Rv_KO_CtpC | -1.209 | -1.304 |
| H37Rv_KO_CtpD | 0.317 | -0.851 |
| H37Rv_KO_Rv1272 | -0.465 | -0.977 |
| H37Rv_KO_SugABC | 0.991 | 0.64 |
| H37Rv_KO_MbtN | 0.116 | -0.235 |
| Trans05 | 0.115 | -1.079 |
| macrophage_unactivated | 4.11 | 4.056 |
| IL1 | -3.067 | -2.462 |
| Rapamycin | -2.968 | -2.308 |
| Tcell | 4.06 | 4.005 |
| GMCSF | -3.535 | -2.886 |
| IFNab | -2.364 | -2.273 |
| IFNg | -4.327 | -3.782 |
| IFNg_GMCSF1 | -0.443 | -1.304 |
| Rv1432_day32 | -0.391 | 0.763 |
| Rv1565c_day32 | -2.357 | -0.199 |
| secA2_input | -0.734 | -0.639 |
| delta_Rv3594 | -2.487 | -2.489 |
| delta_Rv3717 | -2.58 | -2.245 |
| delta_Rv3811 | -2.538 | -2.211 |
| delta_Rv0954 | -2.101 | -1.053 |
| PonA1 | -1.645 | -1.29 |
| EccD1_KO | -4.535 | -3.595 |
| EspI_KO | -3.046 | -1.934 |
| PE35_KO | 2.438 | 1.96 |
| PPE68_KO | 0.275 | 0.141 |
| glycerol2 | 1.002 | 0.954 |
| lignocerate | 1.08 | 0.655 |
| oleate | 1.059 | 1.185 |
| phosphatidylcholine | 1.064 | 1.076 |
| acetate | 0.133 | -0.421 |
| glucAc | -0.177 | -0.462 |
| Rv0950ko | -4.095 | -3.757 |
| Rv1096ko | -5.805 | -5.398 |
| Rv3684ko | -3.439 | -3.449 |
| delta_otsA_trehalose | -0.972 | 0.356 |