Top 10 genes with highest correlation to Rv2938/drrC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2936/drrA | (cc=0.9415) | info on Rv2936/drrA |
| Rv2937/drrB | (cc=0.9369) | info on Rv2937/drrB |
| Rv2942/mmpL7 | (cc=0.8285) | info on Rv2942/mmpL7 |
| Rv2945c/lppX | (cc=0.7964) | info on Rv2945c/lppX |
| Rv2249c/glpD1 | (cc=0.6128) | info on Rv2249c/glpD1 |
| Rv2952/- | (cc=0.5768) | info on Rv2952/- |
| Rv0097/- | (cc=0.5218) | info on Rv0097/- |
| Rv1099c/glpX | (cc=0.5186) | info on Rv1099c/glpX |
| Rv2946c/pks1 | (cc=0.5147) | info on Rv2946c/pks1 |
| Rv1109c/- | (cc=0.4922) | info on Rv1109c/- |
Correlation of Rv2938/drrC with Rv2937/drrB
Normalized LFCs for Rv2938/drrC:
(description and provenance of datasets)
| Rv2938/drrC | Rv2937/drrB | |
| Fe_supp_jason_reseq | 0.434 | 0.259 |
| low_pH_jason_reseq | 1.402 | 0.93 |
| NO_jason_reseq | -2.788 | -2.77 |
| B6_jason_reseq | -1.025 | -1.599 |
| MHCII_jason_reseq | -1.658 | -1.823 |
| Isoniazid02 | -1.053 | 0.172 |
| Rifampicin4 | -1.836 | -0.328 |
| Ethambutol3 | -0.187 | 0.353 |
| Meropenem3 | -0.414 | 0.99 |
| Vancomycin16 | -1.722 | -0.462 |
| Rv2680_day32 | -2.522 | -2.235 |
| H37Rv_KO_MarP | -3.032 | -2.698 |
| hypoxia_3wks | 2.508 | 2.149 |
| hypoxia_6wks | 2.721 | 2.353 |
| glycerol | 0.611 | -0.799 |
| cholesterol | 2.289 | 1.802 |
| AJ | -3.787 | -3.817 |
| Bibs02 | -1.285 | -0.827 |
| Bibs02c | -0.964 | -0.828 |
| BL6 | 0.343 | 1.228 |
| BL6a | 0.072 | -0.175 |
| BXD01 | 0.999 | 1.26 |
| BXD010 | 0.721 | 1.349 |
| BXD011 | 1.051 | 0.599 |
| BXD03 | 0.185 | 0.56 |
| BXD04 | 0.653 | 0.761 |
| BXD05 | 0.472 | 0.201 |
| BXD06 | 0.536 | 0.586 |
| BXD07 | 0.737 | 0.396 |
| BXD08 | 0.63 | 1.188 |
| BXD09 | 0.051 | 0.186 |
| CAST | -2.257 | -1.872 |
| CCcont | 1.192 | 1.677 |
| DS01 | 0.068 | -0.358 |
| DS02 | 0.446 | -0.354 |
| DS04 | -1.178 | -1.054 |
| DS0c | 0.154 | -0.041 |
| GP01 | -1.24 | -1.538 |
| GP02 | -1.711 | -1.8 |
| GP0c | 0.913 | 0.547 |
| NOD | -1.852 | -1.606 |
| NZO | -2.875 | -2.659 |
| PWK | -2.663 | -2.899 |
| H37Rv_KO_CtpC | -0.111 | -0.807 |
| H37Rv_KO_CtpD | -0.116 | -0.688 |
| H37Rv_KO_Rv1272 | 0.634 | 0.792 |
| H37Rv_KO_SugABC | 1.366 | 1.115 |
| H37Rv_KO_MbtN | 1.331 | 1.261 |
| Trans05 | 1.191 | 1.007 |
| macrophage_unactivated | -0.167 | 0.278 |
| IL1 | -0.504 | -0.015 |
| Rapamycin | -1.338 | -1.0 |
| Tcell | 2.848 | 3.506 |
| GMCSF | -3.174 | -2.96 |
| IFNab | -0.206 | -1.279 |
| IFNg | -4.348 | -4.105 |
| IFNg_GMCSF1 | -4.141 | -4.267 |
| Rv1432_day32 | -4.85 | -4.562 |
| Rv1565c_day32 | -4.634 | -4.958 |
| secA2_input | -1.23 | -1.199 |
| delta_Rv3594 | -1.296 | -1.011 |
| delta_Rv3717 | -1.417 | -1.031 |
| delta_Rv3811 | -1.5 | -0.669 |
| delta_Rv0954 | -1.472 | -0.727 |
| PonA1 | -1.151 | -0.791 |
| EccD1_KO | 0.27 | -0.779 |
| EspI_KO | 0.191 | 0.185 |
| PE35_KO | 0.195 | -0.948 |
| PPE68_KO | 0.307 | -0.909 |
| glycerol2 | 0.071 | 0.472 |
| lignocerate | 0.192 | 0.416 |
| oleate | -0.308 | 0.51 |
| phosphatidylcholine | 0.256 | 0.58 |
| acetate | -0.178 | -0.786 |
| glucAc | 0.006 | -0.3 |
| Rv0950ko | -0.615 | -0.458 |
| Rv1096ko | 0.648 | 0.163 |
| Rv3684ko | -0.38 | -0.301 |
| delta_otsA_trehalose | -0.24 | -0.808 |