Top 10 genes with highest correlation to Rv2849c/cobO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0096/PPE1 | (cc=0.5343) | info on Rv0096/PPE1 |
| Rv0926c/- | (cc=0.5293) | info on Rv0926c/- |
| Rv1473A/- | (cc=0.4935) | info on Rv1473A/- |
| Rv3867/espH | (cc=0.4797) | info on Rv3867/espH |
| Rv2734/- | (cc=0.4602) | info on Rv2734/- |
| Rv1404/- | (cc=0.4452) | info on Rv1404/- |
| Rv0380c/- | (cc=0.4373) | info on Rv0380c/- |
| Rv1234/- | (cc=0.4354) | info on Rv1234/- |
| Rv1972/- | (cc=0.4352) | info on Rv1972/- |
| Rv0500A/- | (cc=0.4255) | info on Rv0500A/- |
Correlation of Rv2849c/cobO with Rv3867/espH
Normalized LFCs for Rv2849c/cobO:
(description and provenance of datasets)
| Rv2849c/cobO | Rv3867/espH | |
| Fe_supp_jason_reseq | 0.496 | -0.346 |
| low_pH_jason_reseq | 0.666 | 0.606 |
| NO_jason_reseq | 0.559 | -1.636 |
| B6_jason_reseq | -0.613 | -1.753 |
| MHCII_jason_reseq | -0.393 | -2.73 |
| Isoniazid02 | 0.588 | -0.087 |
| Rifampicin4 | 0.636 | 0.29 |
| Ethambutol3 | -0.097 | -0.032 |
| Meropenem3 | 0.189 | 1.138 |
| Vancomycin16 | 0.982 | 0.363 |
| Rv2680_day32 | -1.007 | -1.087 |
| H37Rv_KO_MarP | 0.182 | 1.041 |
| hypoxia_3wks | 0.279 | 0.06 |
| hypoxia_6wks | -1.251 | 0.188 |
| glycerol | -0.459 | -1.821 |
| cholesterol | -0.503 | -1.252 |
| AJ | -0.698 | -4.059 |
| Bibs02 | -0.578 | -1.099 |
| Bibs02c | -1.085 | -1.238 |
| BL6 | 0.391 | -1.542 |
| BL6a | -0.023 | -0.792 |
| BXD01 | -0.092 | -0.49 |
| BXD010 | 1.328 | -0.734 |
| BXD011 | 0.886 | 0.776 |
| BXD03 | 1.947 | -0.015 |
| BXD04 | -0.057 | -0.909 |
| BXD05 | 1.372 | -0.975 |
| BXD06 | 1.034 | -0.317 |
| BXD07 | 0.443 | -0.741 |
| BXD08 | 0.752 | -0.343 |
| BXD09 | 1.233 | 0.297 |
| CAST | -0.799 | -2.107 |
| CCcont | -0.238 | -0.314 |
| DS01 | 0.053 | -2.561 |
| DS02 | -0.654 | -1.308 |
| DS04 | -0.8 | -1.005 |
| DS0c | -0.894 | -0.427 |
| GP01 | -0.672 | -0.221 |
| GP02 | -0.792 | -1.322 |
| GP0c | -0.091 | 0.275 |
| NOD | -2.792 | -1.308 |
| NZO | -2.407 | -3.802 |
| PWK | -0.843 | -3.376 |
| H37Rv_KO_CtpC | 1.092 | -1.125 |
| H37Rv_KO_CtpD | -1.725 | 0.034 |
| H37Rv_KO_Rv1272 | 0.236 | -0.598 |
| H37Rv_KO_SugABC | 0.374 | 0.38 |
| H37Rv_KO_MbtN | 0.122 | -0.515 |
| Trans05 | -0.833 | -0.664 |
| macrophage_unactivated | -0.085 | -0.363 |
| IL1 | 0.454 | 1.181 |
| Rapamycin | 1.218 | 0.669 |
| Tcell | -0.059 | 0.134 |
| GMCSF | 1.824 | 0.063 |
| IFNab | -0.193 | 0.124 |
| IFNg | 1.221 | 0.732 |
| IFNg_GMCSF1 | 1.753 | -0.022 |
| Rv1432_day32 | -0.961 | -0.915 |
| Rv1565c_day32 | -2.96 | -4.072 |
| secA2_input | 0.784 | -0.967 |
| delta_Rv3594 | 0.597 | -1.156 |
| delta_Rv3717 | 0.756 | -0.669 |
| delta_Rv3811 | 0.097 | -1.08 |
| delta_Rv0954 | 0.978 | -0.274 |
| PonA1 | -1.098 | -0.688 |
| EccD1_KO | -0.569 | -0.066 |
| EspI_KO | 1.255 | 0.308 |
| PE35_KO | 1.003 | 0.041 |
| PPE68_KO | 0.234 | 0.0 |
| glycerol2 | -2.14 | 0.184 |
| lignocerate | -0.669 | -0.537 |
| oleate | -2.355 | -1.483 |
| phosphatidylcholine | -0.738 | -1.179 |
| acetate | -0.642 | -0.211 |
| glucAc | 1.965 | 0.178 |
| Rv0950ko | 0.28 | -0.015 |
| Rv1096ko | 0.914 | -0.498 |
| Rv3684ko | 0.118 | -0.996 |
| delta_otsA_trehalose | -0.197 | -3.661 |