Top 10 genes with highest correlation to Rv2849c/cobO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0096/PPE1 | (cc=0.5343) | info on Rv0096/PPE1 |
| Rv0926c/- | (cc=0.5293) | info on Rv0926c/- |
| Rv1473A/- | (cc=0.4935) | info on Rv1473A/- |
| Rv3867/espH | (cc=0.4797) | info on Rv3867/espH |
| Rv2734/- | (cc=0.4602) | info on Rv2734/- |
| Rv1404/- | (cc=0.4452) | info on Rv1404/- |
| Rv0380c/- | (cc=0.4373) | info on Rv0380c/- |
| Rv1234/- | (cc=0.4354) | info on Rv1234/- |
| Rv1972/- | (cc=0.4352) | info on Rv1972/- |
| Rv0500A/- | (cc=0.4255) | info on Rv0500A/- |
Correlation of Rv2849c/cobO with Rv1234/-
Normalized LFCs for Rv2849c/cobO:
(description and provenance of datasets)
| Rv2849c/cobO | Rv1234/- | |
| Fe_supp_jason_reseq | 0.496 | -0.83 |
| low_pH_jason_reseq | 0.666 | 0.085 |
| NO_jason_reseq | 0.559 | 0.425 |
| B6_jason_reseq | -0.613 | -1.557 |
| MHCII_jason_reseq | -0.393 | -1.173 |
| Isoniazid02 | 0.588 | -1.133 |
| Rifampicin4 | 0.636 | -0.615 |
| Ethambutol3 | -0.097 | 0.134 |
| Meropenem3 | 0.189 | -1.329 |
| Vancomycin16 | 0.982 | -1.143 |
| Rv2680_day32 | -1.007 | -0.117 |
| H37Rv_KO_MarP | 0.182 | 0.488 |
| hypoxia_3wks | 0.279 | -1.878 |
| hypoxia_6wks | -1.251 | -1.349 |
| glycerol | -0.459 | -0.288 |
| cholesterol | -0.503 | 1.031 |
| AJ | -0.698 | -1.98 |
| Bibs02 | -0.578 | 0.522 |
| Bibs02c | -1.085 | -2.884 |
| BL6 | 0.391 | -1.376 |
| BL6a | -0.023 | -0.926 |
| BXD01 | -0.092 | -0.15 |
| BXD010 | 1.328 | -0.726 |
| BXD011 | 0.886 | 0.433 |
| BXD03 | 1.947 | -1.746 |
| BXD04 | -0.057 | 0.22 |
| BXD05 | 1.372 | -0.017 |
| BXD06 | 1.034 | -0.843 |
| BXD07 | 0.443 | 0.969 |
| BXD08 | 0.752 | 0.196 |
| BXD09 | 1.233 | 0.083 |
| CAST | -0.799 | -0.394 |
| CCcont | -0.238 | -0.132 |
| DS01 | 0.053 | -1.769 |
| DS02 | -0.654 | -0.468 |
| DS04 | -0.8 | -1.06 |
| DS0c | -0.894 | -1.912 |
| GP01 | -0.672 | 0.79 |
| GP02 | -0.792 | -0.833 |
| GP0c | -0.091 | 0.801 |
| NOD | -2.792 | -1.796 |
| NZO | -2.407 | -0.894 |
| PWK | -0.843 | -1.729 |
| H37Rv_KO_CtpC | 1.092 | 1.033 |
| H37Rv_KO_CtpD | -1.725 | -0.949 |
| H37Rv_KO_Rv1272 | 0.236 | 0.643 |
| H37Rv_KO_SugABC | 0.374 | 1.74 |
| H37Rv_KO_MbtN | 0.122 | -0.938 |
| Trans05 | -0.833 | 1.537 |
| macrophage_unactivated | -0.085 | 0.492 |
| IL1 | 0.454 | 1.934 |
| Rapamycin | 1.218 | 1.725 |
| Tcell | -0.059 | -0.42 |
| GMCSF | 1.824 | 2.339 |
| IFNab | -0.193 | 1.097 |
| IFNg | 1.221 | 3.375 |
| IFNg_GMCSF1 | 1.753 | 2.853 |
| Rv1432_day32 | -0.961 | -2.515 |
| Rv1565c_day32 | -2.96 | -2.132 |
| secA2_input | 0.784 | 1.057 |
| delta_Rv3594 | 0.597 | 0.052 |
| delta_Rv3717 | 0.756 | 0.147 |
| delta_Rv3811 | 0.097 | -0.134 |
| delta_Rv0954 | 0.978 | 1.39 |
| PonA1 | -1.098 | 0.343 |
| EccD1_KO | -0.569 | 1.289 |
| EspI_KO | 1.255 | 1.283 |
| PE35_KO | 1.003 | 0.551 |
| PPE68_KO | 0.234 | 0.899 |
| glycerol2 | -2.14 | -1.974 |
| lignocerate | -0.669 | -1.735 |
| oleate | -2.355 | -0.332 |
| phosphatidylcholine | -0.738 | -0.98 |
| acetate | -0.642 | -1.102 |
| glucAc | 1.965 | -2.014 |
| Rv0950ko | 0.28 | 0.908 |
| Rv1096ko | 0.914 | 0.371 |
| Rv3684ko | 0.118 | 1.831 |
| delta_otsA_trehalose | -0.197 | -0.058 |