Top 10 genes with highest correlation to Rv2849c/cobO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0096/PPE1 | (cc=0.5343) | info on Rv0096/PPE1 |
| Rv0926c/- | (cc=0.5293) | info on Rv0926c/- |
| Rv1473A/- | (cc=0.4935) | info on Rv1473A/- |
| Rv3867/espH | (cc=0.4797) | info on Rv3867/espH |
| Rv2734/- | (cc=0.4602) | info on Rv2734/- |
| Rv1404/- | (cc=0.4452) | info on Rv1404/- |
| Rv0380c/- | (cc=0.4373) | info on Rv0380c/- |
| Rv1234/- | (cc=0.4354) | info on Rv1234/- |
| Rv1972/- | (cc=0.4352) | info on Rv1972/- |
| Rv0500A/- | (cc=0.4255) | info on Rv0500A/- |
Correlation of Rv2849c/cobO with Rv1404/-
Normalized LFCs for Rv2849c/cobO:
(description and provenance of datasets)
| Rv2849c/cobO | Rv1404/- | |
| Fe_supp_jason_reseq | 0.496 | 2.382 |
| low_pH_jason_reseq | 0.666 | -1.328 |
| NO_jason_reseq | 0.559 | 0.281 |
| B6_jason_reseq | -0.613 | 1.228 |
| MHCII_jason_reseq | -0.393 | -0.776 |
| Isoniazid02 | 0.588 | 0.332 |
| Rifampicin4 | 0.636 | 0.422 |
| Ethambutol3 | -0.097 | 0.235 |
| Meropenem3 | 0.189 | 0.395 |
| Vancomycin16 | 0.982 | -0.589 |
| Rv2680_day32 | -1.007 | 0.803 |
| H37Rv_KO_MarP | 0.182 | 0.478 |
| hypoxia_3wks | 0.279 | 0.287 |
| hypoxia_6wks | -1.251 | -0.159 |
| glycerol | -0.459 | -1.862 |
| cholesterol | -0.503 | -1.612 |
| AJ | -0.698 | -0.671 |
| Bibs02 | -0.578 | -2.035 |
| Bibs02c | -1.085 | -2.12 |
| BL6 | 0.391 | 0.993 |
| BL6a | -0.023 | 0.0 |
| BXD01 | -0.092 | -0.048 |
| BXD010 | 1.328 | 1.358 |
| BXD011 | 0.886 | 0.968 |
| BXD03 | 1.947 | 1.162 |
| BXD04 | -0.057 | 0.167 |
| BXD05 | 1.372 | -0.209 |
| BXD06 | 1.034 | 1.229 |
| BXD07 | 0.443 | 0.352 |
| BXD08 | 0.752 | 0.729 |
| BXD09 | 1.233 | 1.092 |
| CAST | -0.799 | -1.018 |
| CCcont | -0.238 | 1.732 |
| DS01 | 0.053 | -2.178 |
| DS02 | -0.654 | -0.249 |
| DS04 | -0.8 | -0.753 |
| DS0c | -0.894 | -0.958 |
| GP01 | -0.672 | -1.099 |
| GP02 | -0.792 | -0.926 |
| GP0c | -0.091 | -1.199 |
| NOD | -2.792 | -1.119 |
| NZO | -2.407 | -0.994 |
| PWK | -0.843 | -1.809 |
| H37Rv_KO_CtpC | 1.092 | -1.808 |
| H37Rv_KO_CtpD | -1.725 | -0.787 |
| H37Rv_KO_Rv1272 | 0.236 | -0.972 |
| H37Rv_KO_SugABC | 0.374 | 1.453 |
| H37Rv_KO_MbtN | 0.122 | -0.348 |
| Trans05 | -0.833 | -0.812 |
| macrophage_unactivated | -0.085 | -0.89 |
| IL1 | 0.454 | 0.641 |
| Rapamycin | 1.218 | -0.611 |
| Tcell | -0.059 | 0.433 |
| GMCSF | 1.824 | 0.57 |
| IFNab | -0.193 | 0.889 |
| IFNg | 1.221 | 0.123 |
| IFNg_GMCSF1 | 1.753 | 0.55 |
| Rv1432_day32 | -0.961 | -0.961 |
| Rv1565c_day32 | -2.96 | -0.114 |
| secA2_input | 0.784 | 0.0 |
| delta_Rv3594 | 0.597 | 1.326 |
| delta_Rv3717 | 0.756 | 0.384 |
| delta_Rv3811 | 0.097 | 2.357 |
| delta_Rv0954 | 0.978 | 0.302 |
| PonA1 | -1.098 | 0.503 |
| EccD1_KO | -0.569 | -1.131 |
| EspI_KO | 1.255 | 2.321 |
| PE35_KO | 1.003 | 0.481 |
| PPE68_KO | 0.234 | 0.272 |
| glycerol2 | -2.14 | -0.347 |
| lignocerate | -0.669 | 0.712 |
| oleate | -2.355 | -2.535 |
| phosphatidylcholine | -0.738 | -0.618 |
| acetate | -0.642 | 0.459 |
| glucAc | 1.965 | 0.777 |
| Rv0950ko | 0.28 | 1.683 |
| Rv1096ko | 0.914 | -0.941 |
| Rv3684ko | 0.118 | -0.134 |
| delta_otsA_trehalose | -0.197 | 0.239 |