Top 10 genes with highest correlation to Rv2806/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2231c/cobC | (cc=0.5281) | info on Rv2231c/cobC |
| Rv1996/- | (cc=0.5175) | info on Rv1996/- |
| Rv2774c/- | (cc=0.4999) | info on Rv2774c/- |
| Rv3178/- | (cc=0.4896) | info on Rv3178/- |
| Rv0049/- | (cc=0.4747) | info on Rv0049/- |
| Rv3338/- | (cc=0.4736) | info on Rv3338/- |
| Rv3392c/cmaA1 | (cc=0.4722) | info on Rv3392c/cmaA1 |
| Rv2639c/- | (cc=0.4656) | info on Rv2639c/- |
| Rv2653c/- | (cc=0.4653) | info on Rv2653c/- |
| Rv1753c/PPE24 | (cc=0.4632) | info on Rv1753c/PPE24 |
Correlation of Rv2806/- with Rv3338/-
Normalized LFCs for Rv2806/-:
(description and provenance of datasets)
| Rv2806/- | Rv3338/- | |
| Fe_supp_jason_reseq | -0.54 | -0.766 |
| low_pH_jason_reseq | -1.087 | -1.106 |
| NO_jason_reseq | -0.992 | -1.735 |
| B6_jason_reseq | -0.321 | -0.352 |
| MHCII_jason_reseq | 0.315 | -1.465 |
| Isoniazid02 | -0.589 | 0.336 |
| Rifampicin4 | -0.495 | -0.246 |
| Ethambutol3 | -0.754 | 0.17 |
| Meropenem3 | -0.621 | -0.036 |
| Vancomycin16 | -0.045 | -0.326 |
| Rv2680_day32 | -0.554 | -2.697 |
| H37Rv_KO_MarP | 0.023 | 0.337 |
| hypoxia_3wks | 1.196 | 1.013 |
| hypoxia_6wks | 1.063 | 0.453 |
| glycerol | 0.513 | -0.347 |
| cholesterol | -1.016 | -0.209 |
| AJ | 1.407 | 0.309 |
| Bibs02 | 0.343 | -0.167 |
| Bibs02c | -0.808 | -1.296 |
| BL6 | -0.483 | 1.162 |
| BL6a | -0.036 | -0.016 |
| BXD01 | 1.022 | 1.324 |
| BXD010 | 0.486 | 0.01 |
| BXD011 | 0.584 | 0.281 |
| BXD03 | 0.325 | 1.874 |
| BXD04 | 0.308 | -0.308 |
| BXD05 | 0.544 | -1.283 |
| BXD06 | 0.394 | -0.698 |
| BXD07 | 1.055 | 0.126 |
| BXD08 | 0.866 | 1.481 |
| BXD09 | 0.482 | -0.547 |
| CAST | 0.093 | 0.432 |
| CCcont | -0.766 | -1.154 |
| DS01 | 0.135 | -1.531 |
| DS02 | 0.947 | -3.017 |
| DS04 | 0.354 | 1.117 |
| DS0c | 0.418 | -0.793 |
| GP01 | 0.576 | 0.118 |
| GP02 | 0.207 | 2.55 |
| GP0c | -0.269 | 0.295 |
| NOD | -0.449 | -0.675 |
| NZO | 1.428 | 1.036 |
| PWK | 1.144 | 0.135 |
| H37Rv_KO_CtpC | 0.84 | -0.613 |
| H37Rv_KO_CtpD | -1.44 | -0.785 |
| H37Rv_KO_Rv1272 | 1.179 | -0.999 |
| H37Rv_KO_SugABC | 0.568 | -2.062 |
| H37Rv_KO_MbtN | 1.216 | 1.059 |
| Trans05 | 1.05 | 1.581 |
| macrophage_unactivated | 0.237 | -0.253 |
| IL1 | -0.208 | -1.219 |
| Rapamycin | 0.307 | -2.007 |
| Tcell | 0.701 | -0.147 |
| GMCSF | -0.586 | -0.341 |
| IFNab | -0.435 | -1.333 |
| IFNg | -0.094 | -1.139 |
| IFNg_GMCSF1 | -0.163 | -1.153 |
| Rv1432_day32 | 0.733 | 0.18 |
| Rv1565c_day32 | -0.539 | -0.218 |
| secA2_input | -0.218 | -1.583 |
| delta_Rv3594 | 2.226 | 2.1 |
| delta_Rv3717 | 1.441 | 1.258 |
| delta_Rv3811 | 2.28 | 0.439 |
| delta_Rv0954 | 1.567 | 1.018 |
| PonA1 | 0.925 | 0.65 |
| EccD1_KO | 0.0 | -0.109 |
| EspI_KO | -0.026 | -0.14 |
| PE35_KO | 0.42 | -0.61 |
| PPE68_KO | 0.637 | 0.051 |
| glycerol2 | 0.205 | -0.273 |
| lignocerate | -0.393 | -1.501 |
| oleate | 1.009 | 1.161 |
| phosphatidylcholine | 0.356 | -0.615 |
| acetate | -0.735 | -2.529 |
| glucAc | -1.598 | -2.186 |
| Rv0950ko | 0.516 | 0.522 |
| Rv1096ko | -0.187 | 0.564 |
| Rv3684ko | 0.265 | 0.386 |
| delta_otsA_trehalose | -0.492 | 0.4 |