Top 10 genes with highest correlation to Rv2806/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2231c/cobC | (cc=0.5281) | info on Rv2231c/cobC |
| Rv1996/- | (cc=0.5175) | info on Rv1996/- |
| Rv2774c/- | (cc=0.4999) | info on Rv2774c/- |
| Rv3178/- | (cc=0.4896) | info on Rv3178/- |
| Rv0049/- | (cc=0.4747) | info on Rv0049/- |
| Rv3338/- | (cc=0.4736) | info on Rv3338/- |
| Rv3392c/cmaA1 | (cc=0.4722) | info on Rv3392c/cmaA1 |
| Rv2639c/- | (cc=0.4656) | info on Rv2639c/- |
| Rv2653c/- | (cc=0.4653) | info on Rv2653c/- |
| Rv1753c/PPE24 | (cc=0.4632) | info on Rv1753c/PPE24 |
Correlation of Rv2806/- with Rv2653c/-
Normalized LFCs for Rv2806/-:
(description and provenance of datasets)
| Rv2806/- | Rv2653c/- | |
| Fe_supp_jason_reseq | -0.54 | 0.598 |
| low_pH_jason_reseq | -1.087 | 0.811 |
| NO_jason_reseq | -0.992 | 0.0 |
| B6_jason_reseq | -0.321 | 2.005 |
| MHCII_jason_reseq | 0.315 | 0.0 |
| Isoniazid02 | -0.589 | 0.0 |
| Rifampicin4 | -0.495 | 0.0 |
| Ethambutol3 | -0.754 | 0.0 |
| Meropenem3 | -0.621 | 0.0 |
| Vancomycin16 | -0.045 | 0.0 |
| Rv2680_day32 | -0.554 | 0.0 |
| H37Rv_KO_MarP | 0.023 | -0.586 |
| hypoxia_3wks | 1.196 | 1.639 |
| hypoxia_6wks | 1.063 | -0.689 |
| glycerol | 0.513 | -1.665 |
| cholesterol | -1.016 | -1.194 |
| AJ | 1.407 | 1.324 |
| Bibs02 | 0.343 | -1.507 |
| Bibs02c | -0.808 | -1.725 |
| BL6 | -0.483 | -1.031 |
| BL6a | -0.036 | -0.534 |
| BXD01 | 1.022 | 1.963 |
| BXD010 | 0.486 | -0.704 |
| BXD011 | 0.584 | 0.272 |
| BXD03 | 0.325 | -0.856 |
| BXD04 | 0.308 | -0.495 |
| BXD05 | 0.544 | 0.389 |
| BXD06 | 0.394 | 0.432 |
| BXD07 | 1.055 | 0.829 |
| BXD08 | 0.866 | -0.628 |
| BXD09 | 0.482 | 0.354 |
| CAST | 0.093 | 0.581 |
| CCcont | -0.766 | -1.231 |
| DS01 | 0.135 | 0.0 |
| DS02 | 0.947 | -1.027 |
| DS04 | 0.354 | -1.228 |
| DS0c | 0.418 | -1.571 |
| GP01 | 0.576 | -0.715 |
| GP02 | 0.207 | -0.686 |
| GP0c | -0.269 | 0.0 |
| NOD | -0.449 | -0.747 |
| NZO | 1.428 | 1.669 |
| PWK | 1.144 | -0.095 |
| H37Rv_KO_CtpC | 0.84 | -1.339 |
| H37Rv_KO_CtpD | -1.44 | -1.044 |
| H37Rv_KO_Rv1272 | 1.179 | 3.154 |
| H37Rv_KO_SugABC | 0.568 | -0.545 |
| H37Rv_KO_MbtN | 1.216 | -0.85 |
| Trans05 | 1.05 | 0.782 |
| macrophage_unactivated | 0.237 | 1.995 |
| IL1 | -0.208 | -2.557 |
| Rapamycin | 0.307 | -2.645 |
| Tcell | 0.701 | 0.658 |
| GMCSF | -0.586 | -1.946 |
| IFNab | -0.435 | -2.606 |
| IFNg | -0.094 | -2.304 |
| IFNg_GMCSF1 | -0.163 | -1.012 |
| Rv1432_day32 | 0.733 | 0.0 |
| Rv1565c_day32 | -0.539 | 0.0 |
| secA2_input | -0.218 | -0.719 |
| delta_Rv3594 | 2.226 | 0.0 |
| delta_Rv3717 | 1.441 | 0.259 |
| delta_Rv3811 | 2.28 | 2.185 |
| delta_Rv0954 | 1.567 | 1.558 |
| PonA1 | 0.925 | -0.437 |
| EccD1_KO | 0.0 | -1.121 |
| EspI_KO | -0.026 | -1.258 |
| PE35_KO | 0.42 | 2.059 |
| PPE68_KO | 0.637 | 1.449 |
| glycerol2 | 0.205 | -0.9 |
| lignocerate | -0.393 | -2.181 |
| oleate | 1.009 | -0.074 |
| phosphatidylcholine | 0.356 | -0.623 |
| acetate | -0.735 | -2.617 |
| glucAc | -1.598 | -4.836 |
| Rv0950ko | 0.516 | 0.706 |
| Rv1096ko | -0.187 | 0.247 |
| Rv3684ko | 0.265 | -2.509 |
| delta_otsA_trehalose | -0.492 | -0.378 |