Top 10 genes with highest correlation to Rv2806/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2231c/cobC | (cc=0.5281) | info on Rv2231c/cobC |
| Rv1996/- | (cc=0.5175) | info on Rv1996/- |
| Rv2774c/- | (cc=0.4999) | info on Rv2774c/- |
| Rv3178/- | (cc=0.4896) | info on Rv3178/- |
| Rv0049/- | (cc=0.4747) | info on Rv0049/- |
| Rv3338/- | (cc=0.4736) | info on Rv3338/- |
| Rv3392c/cmaA1 | (cc=0.4722) | info on Rv3392c/cmaA1 |
| Rv2639c/- | (cc=0.4656) | info on Rv2639c/- |
| Rv2653c/- | (cc=0.4653) | info on Rv2653c/- |
| Rv1753c/PPE24 | (cc=0.4632) | info on Rv1753c/PPE24 |
Correlation of Rv2806/- with Rv0049/-
Normalized LFCs for Rv2806/-:
(description and provenance of datasets)
| Rv2806/- | Rv0049/- | |
| Fe_supp_jason_reseq | -0.54 | 0.404 |
| low_pH_jason_reseq | -1.087 | -0.361 |
| NO_jason_reseq | -0.992 | 2.237 |
| B6_jason_reseq | -0.321 | 2.761 |
| MHCII_jason_reseq | 0.315 | 1.686 |
| Isoniazid02 | -0.589 | -4.265 |
| Rifampicin4 | -0.495 | -2.889 |
| Ethambutol3 | -0.754 | -4.182 |
| Meropenem3 | -0.621 | -1.01 |
| Vancomycin16 | -0.045 | -6.0 |
| Rv2680_day32 | -0.554 | -1.252 |
| H37Rv_KO_MarP | 0.023 | -5.444 |
| hypoxia_3wks | 1.196 | -0.546 |
| hypoxia_6wks | 1.063 | -1.334 |
| glycerol | 0.513 | 0.774 |
| cholesterol | -1.016 | 1.774 |
| AJ | 1.407 | 0.889 |
| Bibs02 | 0.343 | -2.229 |
| Bibs02c | -0.808 | -0.308 |
| BL6 | -0.483 | 1.028 |
| BL6a | -0.036 | 2.627 |
| BXD01 | 1.022 | 2.217 |
| BXD010 | 0.486 | 2.728 |
| BXD011 | 0.584 | 4.652 |
| BXD03 | 0.325 | 3.087 |
| BXD04 | 0.308 | 2.028 |
| BXD05 | 0.544 | 3.906 |
| BXD06 | 0.394 | 4.436 |
| BXD07 | 1.055 | 4.021 |
| BXD08 | 0.866 | 2.172 |
| BXD09 | 0.482 | 2.471 |
| CAST | 0.093 | -1.203 |
| CCcont | -0.766 | 2.649 |
| DS01 | 0.135 | -1.921 |
| DS02 | 0.947 | -2.774 |
| DS04 | 0.354 | 0.575 |
| DS0c | 0.418 | -2.211 |
| GP01 | 0.576 | 1.773 |
| GP02 | 0.207 | 2.935 |
| GP0c | -0.269 | 3.495 |
| NOD | -0.449 | -1.515 |
| NZO | 1.428 | 1.376 |
| PWK | 1.144 | 3.436 |
| H37Rv_KO_CtpC | 0.84 | 1.75 |
| H37Rv_KO_CtpD | -1.44 | -1.411 |
| H37Rv_KO_Rv1272 | 1.179 | 2.554 |
| H37Rv_KO_SugABC | 0.568 | 2.361 |
| H37Rv_KO_MbtN | 1.216 | 4.289 |
| Trans05 | 1.05 | 1.424 |
| macrophage_unactivated | 0.237 | 0.268 |
| IL1 | -0.208 | 1.092 |
| Rapamycin | 0.307 | -0.42 |
| Tcell | 0.701 | 2.9 |
| GMCSF | -0.586 | -2.044 |
| IFNab | -0.435 | -1.811 |
| IFNg | -0.094 | 0.043 |
| IFNg_GMCSF1 | -0.163 | -0.949 |
| Rv1432_day32 | 0.733 | 4.133 |
| Rv1565c_day32 | -0.539 | 0.218 |
| secA2_input | -0.218 | 2.224 |
| delta_Rv3594 | 2.226 | 6.0 |
| delta_Rv3717 | 1.441 | 6.0 |
| delta_Rv3811 | 2.28 | 5.737 |
| delta_Rv0954 | 1.567 | 4.229 |
| PonA1 | 0.925 | 1.526 |
| EccD1_KO | 0.0 | -0.763 |
| EspI_KO | -0.026 | -0.257 |
| PE35_KO | 0.42 | -1.062 |
| PPE68_KO | 0.637 | 0.47 |
| glycerol2 | 0.205 | 0.227 |
| lignocerate | -0.393 | -1.453 |
| oleate | 1.009 | -1.11 |
| phosphatidylcholine | 0.356 | -1.426 |
| acetate | -0.735 | 0.347 |
| glucAc | -1.598 | 0.216 |
| Rv0950ko | 0.516 | -0.461 |
| Rv1096ko | -0.187 | 0.308 |
| Rv3684ko | 0.265 | 1.618 |
| delta_otsA_trehalose | -0.492 | -0.75 |