Top 10 genes with highest correlation to Rv2806/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2231c/cobC | (cc=0.5281) | info on Rv2231c/cobC |
Rv1996/- | (cc=0.5175) | info on Rv1996/- |
Rv2774c/- | (cc=0.4999) | info on Rv2774c/- |
Rv3178/- | (cc=0.4896) | info on Rv3178/- |
Rv0049/- | (cc=0.4747) | info on Rv0049/- |
Rv3338/- | (cc=0.4736) | info on Rv3338/- |
Rv3392c/cmaA1 | (cc=0.4722) | info on Rv3392c/cmaA1 |
Rv2639c/- | (cc=0.4656) | info on Rv2639c/- |
Rv2653c/- | (cc=0.4653) | info on Rv2653c/- |
Rv1753c/PPE24 | (cc=0.4632) | info on Rv1753c/PPE24 |
Correlation of Rv2806/- with Rv2231c/cobC
Normalized LFCs for Rv2806/-:
(description and provenance of datasets)
Rv2806/- | Rv2231c/cobC | |
Fe_supp_jason_reseq | -0.54 | -0.463 |
low_pH_jason_reseq | -1.087 | -0.1 |
NO_jason_reseq | -0.992 | -0.079 |
B6_jason_reseq | -0.321 | -1.435 |
MHCII_jason_reseq | 0.315 | -0.893 |
Isoniazid02 | -0.589 | -0.581 |
Rifampicin4 | -0.495 | 0.133 |
Ethambutol3 | -0.754 | -0.158 |
Meropenem3 | -0.621 | -0.363 |
Vancomycin16 | -0.045 | -0.568 |
Rv2680_day32 | -0.554 | 0.811 |
H37Rv_KO_MarP | 0.023 | -1.507 |
hypoxia_3wks | 1.196 | 0.467 |
hypoxia_6wks | 1.063 | 1.205 |
glycerol | 0.513 | 0.162 |
cholesterol | -1.016 | -0.264 |
AJ | 1.407 | -0.424 |
Bibs02 | 0.343 | 0.946 |
Bibs02c | -0.808 | -0.182 |
BL6 | -0.483 | 0.477 |
BL6a | -0.036 | 1.122 |
BXD01 | 1.022 | 1.214 |
BXD010 | 0.486 | 0.629 |
BXD011 | 0.584 | 1.498 |
BXD03 | 0.325 | 1.088 |
BXD04 | 0.308 | 2.739 |
BXD05 | 0.544 | 1.863 |
BXD06 | 0.394 | 1.947 |
BXD07 | 1.055 | 1.383 |
BXD08 | 0.866 | 2.292 |
BXD09 | 0.482 | 1.614 |
CAST | 0.093 | -0.791 |
CCcont | -0.766 | 1.202 |
DS01 | 0.135 | 0.0 |
DS02 | 0.947 | -0.189 |
DS04 | 0.354 | -0.453 |
DS0c | 0.418 | 1.383 |
GP01 | 0.576 | 0.0 |
GP02 | 0.207 | -0.286 |
GP0c | -0.269 | -0.113 |
NOD | -0.449 | -0.905 |
NZO | 1.428 | 1.225 |
PWK | 1.144 | -0.171 |
H37Rv_KO_CtpC | 0.84 | 0.571 |
H37Rv_KO_CtpD | -1.44 | -0.591 |
H37Rv_KO_Rv1272 | 1.179 | 1.338 |
H37Rv_KO_SugABC | 0.568 | 0.586 |
H37Rv_KO_MbtN | 1.216 | 1.226 |
Trans05 | 1.05 | 1.536 |
macrophage_unactivated | 0.237 | 1.922 |
IL1 | -0.208 | 1.139 |
Rapamycin | 0.307 | 1.669 |
Tcell | 0.701 | 1.189 |
GMCSF | -0.586 | 1.014 |
IFNab | -0.435 | 0.683 |
IFNg | -0.094 | 0.82 |
IFNg_GMCSF1 | -0.163 | 1.546 |
Rv1432_day32 | 0.733 | -0.618 |
Rv1565c_day32 | -0.539 | -1.989 |
secA2_input | -0.218 | -0.62 |
delta_Rv3594 | 2.226 | 2.709 |
delta_Rv3717 | 1.441 | 2.718 |
delta_Rv3811 | 2.28 | 2.314 |
delta_Rv0954 | 1.567 | 1.773 |
PonA1 | 0.925 | 1.506 |
EccD1_KO | 0.0 | 0.201 |
EspI_KO | -0.026 | -0.787 |
PE35_KO | 0.42 | 0.265 |
PPE68_KO | 0.637 | 0.099 |
glycerol2 | 0.205 | 0.0 |
lignocerate | -0.393 | 0.082 |
oleate | 1.009 | 0.539 |
phosphatidylcholine | 0.356 | 0.213 |
acetate | -0.735 | -0.283 |
glucAc | -1.598 | -0.405 |
Rv0950ko | 0.516 | 0.395 |
Rv1096ko | -0.187 | 0.202 |
Rv3684ko | 0.265 | 0.0 |
delta_otsA_trehalose | -0.492 | 0.58 |