Top 10 genes with highest correlation to Rv2793c/truB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0668/rpoC | (cc=0.6459) | info on Rv0668/rpoC |
| Rv0055/rpsR1 | (cc=0.6423) | info on Rv0055/rpsR1 |
| Rv1239c/corA | (cc=0.6378) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6152) | info on Rv3419c/gcp |
| Rv0563/htpX | (cc=0.6128) | info on Rv0563/htpX |
| Rv0805/- | (cc=0.6125) | info on Rv0805/- |
| Rv1100/- | (cc=0.6093) | info on Rv1100/- |
| Rv0508/- | (cc=0.6004) | info on Rv0508/- |
| Rv3278c/- | (cc=0.5974) | info on Rv3278c/- |
| Rv1072/- | (cc=0.5971) | info on Rv1072/- |
Correlation of Rv2793c/truB with Rv3419c/gcp
Normalized LFCs for Rv2793c/truB:
(description and provenance of datasets)
| Rv2793c/truB | Rv3419c/gcp | |
| Fe_supp_jason_reseq | -0.608 | -1.455 |
| low_pH_jason_reseq | 4.833 | 0.353 |
| NO_jason_reseq | 4.258 | 3.179 |
| B6_jason_reseq | -0.921 | 0.578 |
| MHCII_jason_reseq | -2.248 | -1.332 |
| Isoniazid02 | -1.823 | -1.685 |
| Rifampicin4 | -1.516 | 0.845 |
| Ethambutol3 | -3.205 | 1.389 |
| Meropenem3 | -2.159 | 0.0 |
| Vancomycin16 | -2.175 | 0.13 |
| Rv2680_day32 | -0.947 | -0.811 |
| H37Rv_KO_MarP | -1.139 | -0.44 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | -0.163 | 0.0 |
| glycerol | 0.753 | -0.083 |
| cholesterol | -0.509 | -1.447 |
| AJ | 0.866 | 1.536 |
| Bibs02 | 0.0 | -0.703 |
| Bibs02c | 0.887 | -0.467 |
| BL6 | 1.039 | 2.916 |
| BL6a | 1.712 | 1.474 |
| BXD01 | 4.61 | 2.919 |
| BXD010 | 2.013 | 2.677 |
| BXD011 | 1.797 | 3.476 |
| BXD03 | 2.515 | 3.152 |
| BXD04 | 4.249 | 3.199 |
| BXD05 | 0.636 | 2.698 |
| BXD06 | 2.913 | 3.834 |
| BXD07 | 1.871 | 2.848 |
| BXD08 | 2.89 | 3.06 |
| BXD09 | 2.232 | 2.295 |
| CAST | 1.582 | 2.279 |
| CCcont | 1.291 | 2.265 |
| DS01 | 0.479 | -0.775 |
| DS02 | 0.922 | -0.181 |
| DS04 | 0.0 | 0.873 |
| DS0c | -0.547 | -0.278 |
| GP01 | -0.347 | -0.888 |
| GP02 | 0.06 | -0.831 |
| GP0c | -0.457 | 0.775 |
| NOD | -0.789 | 1.01 |
| NZO | 2.387 | 1.777 |
| PWK | 3.574 | 3.711 |
| H37Rv_KO_CtpC | 3.196 | 1.272 |
| H37Rv_KO_CtpD | 0.0 | 2.089 |
| H37Rv_KO_Rv1272 | 0.912 | 0.993 |
| H37Rv_KO_SugABC | 1.006 | 1.521 |
| H37Rv_KO_MbtN | 0.0 | 1.977 |
| Trans05 | 1.041 | 1.517 |
| macrophage_unactivated | -2.374 | -1.045 |
| IL1 | -1.056 | -0.715 |
| Rapamycin | -0.592 | -1.795 |
| Tcell | 0.808 | 0.349 |
| GMCSF | -1.605 | -1.127 |
| IFNab | -0.741 | 0.813 |
| IFNg | -0.249 | -1.141 |
| IFNg_GMCSF1 | -1.91 | -1.191 |
| Rv1432_day32 | -0.441 | -0.395 |
| Rv1565c_day32 | -1.579 | -0.262 |
| secA2_input | 1.404 | -0.163 |
| delta_Rv3594 | -3.694 | 0.598 |
| delta_Rv3717 | -2.848 | 0.992 |
| delta_Rv3811 | -2.974 | 0.949 |
| delta_Rv0954 | -3.46 | -0.774 |
| PonA1 | -0.035 | 0.121 |
| EccD1_KO | 0.0 | 0.368 |
| EspI_KO | 0.305 | -1.229 |
| PE35_KO | 0.601 | -0.353 |
| PPE68_KO | 1.501 | -0.307 |
| glycerol2 | -1.401 | -1.808 |
| lignocerate | -0.947 | -1.93 |
| oleate | -1.596 | -1.829 |
| phosphatidylcholine | -1.239 | -2.043 |
| acetate | 0.535 | -1.453 |
| glucAc | 1.065 | 1.045 |
| Rv0950ko | 0.139 | 0.419 |
| Rv1096ko | -1.113 | -0.259 |
| Rv3684ko | -0.314 | 1.15 |
| delta_otsA_trehalose | 0.0 | 0.965 |