Top 10 genes with highest correlation to Rv2793c/truB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0668/rpoC | (cc=0.6459) | info on Rv0668/rpoC |
| Rv0055/rpsR1 | (cc=0.6423) | info on Rv0055/rpsR1 |
| Rv1239c/corA | (cc=0.6378) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6152) | info on Rv3419c/gcp |
| Rv0563/htpX | (cc=0.6128) | info on Rv0563/htpX |
| Rv0805/- | (cc=0.6125) | info on Rv0805/- |
| Rv1100/- | (cc=0.6093) | info on Rv1100/- |
| Rv0508/- | (cc=0.6004) | info on Rv0508/- |
| Rv3278c/- | (cc=0.5974) | info on Rv3278c/- |
| Rv1072/- | (cc=0.5971) | info on Rv1072/- |
Correlation of Rv2793c/truB with Rv1072/-
Normalized LFCs for Rv2793c/truB:
(description and provenance of datasets)
| Rv2793c/truB | Rv1072/- | |
| Fe_supp_jason_reseq | -0.608 | 3.452 |
| low_pH_jason_reseq | 4.833 | 0.709 |
| NO_jason_reseq | 4.258 | -0.205 |
| B6_jason_reseq | -0.921 | 1.58 |
| MHCII_jason_reseq | -2.248 | 0.0 |
| Isoniazid02 | -1.823 | -2.007 |
| Rifampicin4 | -1.516 | -0.653 |
| Ethambutol3 | -3.205 | 3.263 |
| Meropenem3 | -2.159 | 0.586 |
| Vancomycin16 | -2.175 | -0.727 |
| Rv2680_day32 | -0.947 | -0.803 |
| H37Rv_KO_MarP | -1.139 | -2.718 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | -0.163 | 1.451 |
| glycerol | 0.753 | 0.089 |
| cholesterol | -0.509 | -1.261 |
| AJ | 0.866 | 0.948 |
| Bibs02 | 0.0 | 0.747 |
| Bibs02c | 0.887 | 0.653 |
| BL6 | 1.039 | 2.081 |
| BL6a | 1.712 | 1.728 |
| BXD01 | 4.61 | 3.146 |
| BXD010 | 2.013 | 2.277 |
| BXD011 | 1.797 | 3.036 |
| BXD03 | 2.515 | 2.899 |
| BXD04 | 4.249 | 5.696 |
| BXD05 | 0.636 | 2.5 |
| BXD06 | 2.913 | 2.909 |
| BXD07 | 1.871 | 2.518 |
| BXD08 | 2.89 | 3.668 |
| BXD09 | 2.232 | 1.736 |
| CAST | 1.582 | 4.513 |
| CCcont | 1.291 | 2.429 |
| DS01 | 0.479 | 0.965 |
| DS02 | 0.922 | 0.821 |
| DS04 | 0.0 | 0.793 |
| DS0c | -0.547 | 0.748 |
| GP01 | -0.347 | 0.0 |
| GP02 | 0.06 | -0.166 |
| GP0c | -0.457 | -0.26 |
| NOD | -0.789 | 1.87 |
| NZO | 2.387 | 0.815 |
| PWK | 3.574 | 2.865 |
| H37Rv_KO_CtpC | 3.196 | 3.557 |
| H37Rv_KO_CtpD | 0.0 | 1.054 |
| H37Rv_KO_Rv1272 | 0.912 | 1.837 |
| H37Rv_KO_SugABC | 1.006 | 1.948 |
| H37Rv_KO_MbtN | 0.0 | 2.179 |
| Trans05 | 1.041 | 2.15 |
| macrophage_unactivated | -2.374 | -1.13 |
| IL1 | -1.056 | -1.949 |
| Rapamycin | -0.592 | -2.961 |
| Tcell | 0.808 | 1.466 |
| GMCSF | -1.605 | -1.191 |
| IFNab | -0.741 | 0.0 |
| IFNg | -0.249 | -1.756 |
| IFNg_GMCSF1 | -1.91 | -0.465 |
| Rv1432_day32 | -0.441 | -0.887 |
| Rv1565c_day32 | -1.579 | 0.401 |
| secA2_input | 1.404 | 1.079 |
| delta_Rv3594 | -3.694 | -0.846 |
| delta_Rv3717 | -2.848 | -2.079 |
| delta_Rv3811 | -2.974 | -0.717 |
| delta_Rv0954 | -3.46 | -2.135 |
| PonA1 | -0.035 | -1.272 |
| EccD1_KO | 0.0 | 1.312 |
| EspI_KO | 0.305 | 1.041 |
| PE35_KO | 0.601 | 0.306 |
| PPE68_KO | 1.501 | 0.653 |
| glycerol2 | -1.401 | -0.451 |
| lignocerate | -0.947 | -0.897 |
| oleate | -1.596 | -0.588 |
| phosphatidylcholine | -1.239 | -1.207 |
| acetate | 0.535 | -0.535 |
| glucAc | 1.065 | 0.554 |
| Rv0950ko | 0.139 | 0.28 |
| Rv1096ko | -1.113 | 2.524 |
| Rv3684ko | -0.314 | 2.6 |
| delta_otsA_trehalose | 0.0 | -1.013 |