Top 10 genes with highest correlation to Rv2793c/truB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0668/rpoC | (cc=0.6459) | info on Rv0668/rpoC |
| Rv0055/rpsR1 | (cc=0.6423) | info on Rv0055/rpsR1 |
| Rv1239c/corA | (cc=0.6378) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6152) | info on Rv3419c/gcp |
| Rv0563/htpX | (cc=0.6128) | info on Rv0563/htpX |
| Rv0805/- | (cc=0.6125) | info on Rv0805/- |
| Rv1100/- | (cc=0.6093) | info on Rv1100/- |
| Rv0508/- | (cc=0.6004) | info on Rv0508/- |
| Rv3278c/- | (cc=0.5974) | info on Rv3278c/- |
| Rv1072/- | (cc=0.5971) | info on Rv1072/- |
Correlation of Rv2793c/truB with Rv0055/rpsR1
Normalized LFCs for Rv2793c/truB:
(description and provenance of datasets)
| Rv2793c/truB | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | -0.608 | -1.37 |
| low_pH_jason_reseq | 4.833 | 3.369 |
| NO_jason_reseq | 4.258 | 2.57 |
| B6_jason_reseq | -0.921 | -0.657 |
| MHCII_jason_reseq | -2.248 | 1.143 |
| Isoniazid02 | -1.823 | 2.663 |
| Rifampicin4 | -1.516 | 0.902 |
| Ethambutol3 | -3.205 | -0.441 |
| Meropenem3 | -2.159 | 0.763 |
| Vancomycin16 | -2.175 | -0.294 |
| Rv2680_day32 | -0.947 | 0.109 |
| H37Rv_KO_MarP | -1.139 | -1.325 |
| hypoxia_3wks | 0.0 | -0.678 |
| hypoxia_6wks | -0.163 | 0.084 |
| glycerol | 0.753 | 0.97 |
| cholesterol | -0.509 | -0.276 |
| AJ | 0.866 | 0.983 |
| Bibs02 | 0.0 | 0.0 |
| Bibs02c | 0.887 | 0.336 |
| BL6 | 1.039 | 3.526 |
| BL6a | 1.712 | 3.297 |
| BXD01 | 4.61 | 5.013 |
| BXD010 | 2.013 | 4.197 |
| BXD011 | 1.797 | 5.786 |
| BXD03 | 2.515 | 3.889 |
| BXD04 | 4.249 | 6.0 |
| BXD05 | 0.636 | 4.896 |
| BXD06 | 2.913 | 4.527 |
| BXD07 | 1.871 | 4.203 |
| BXD08 | 2.89 | 5.838 |
| BXD09 | 2.232 | 4.442 |
| CAST | 1.582 | 3.287 |
| CCcont | 1.291 | 3.633 |
| DS01 | 0.479 | 1.381 |
| DS02 | 0.922 | 0.181 |
| DS04 | 0.0 | -0.177 |
| DS0c | -0.547 | 0.0 |
| GP01 | -0.347 | -0.188 |
| GP02 | 0.06 | 0.0 |
| GP0c | -0.457 | -0.248 |
| NOD | -0.789 | 3.817 |
| NZO | 2.387 | -0.182 |
| PWK | 3.574 | 3.083 |
| H37Rv_KO_CtpC | 3.196 | 1.611 |
| H37Rv_KO_CtpD | 0.0 | 1.594 |
| H37Rv_KO_Rv1272 | 0.912 | 2.661 |
| H37Rv_KO_SugABC | 1.006 | -0.189 |
| H37Rv_KO_MbtN | 0.0 | 1.153 |
| Trans05 | 1.041 | 3.074 |
| macrophage_unactivated | -2.374 | 0.0 |
| IL1 | -1.056 | -0.54 |
| Rapamycin | -0.592 | -0.077 |
| Tcell | 0.808 | 1.717 |
| GMCSF | -1.605 | -1.677 |
| IFNab | -0.741 | -0.076 |
| IFNg | -0.249 | -1.31 |
| IFNg_GMCSF1 | -1.91 | -2.916 |
| Rv1432_day32 | -0.441 | 0.0 |
| Rv1565c_day32 | -1.579 | -0.415 |
| secA2_input | 1.404 | 0.997 |
| delta_Rv3594 | -3.694 | -0.812 |
| delta_Rv3717 | -2.848 | -4.252 |
| delta_Rv3811 | -2.974 | -0.106 |
| delta_Rv0954 | -3.46 | -4.366 |
| PonA1 | -0.035 | -1.721 |
| EccD1_KO | 0.0 | -2.578 |
| EspI_KO | 0.305 | 0.0 |
| PE35_KO | 0.601 | 0.134 |
| PPE68_KO | 1.501 | 0.941 |
| glycerol2 | -1.401 | 2.948 |
| lignocerate | -0.947 | 3.955 |
| oleate | -1.596 | -1.418 |
| phosphatidylcholine | -1.239 | 3.751 |
| acetate | 0.535 | 4.357 |
| glucAc | 1.065 | 3.813 |
| Rv0950ko | 0.139 | -0.944 |
| Rv1096ko | -1.113 | -1.08 |
| Rv3684ko | -0.314 | 2.391 |
| delta_otsA_trehalose | 0.0 | 0.0 |