Top 10 genes with highest correlation to Rv2793c/truB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0668/rpoC | (cc=0.6459) | info on Rv0668/rpoC |
| Rv0055/rpsR1 | (cc=0.6423) | info on Rv0055/rpsR1 |
| Rv1239c/corA | (cc=0.6378) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6152) | info on Rv3419c/gcp |
| Rv0563/htpX | (cc=0.6128) | info on Rv0563/htpX |
| Rv0805/- | (cc=0.6125) | info on Rv0805/- |
| Rv1100/- | (cc=0.6093) | info on Rv1100/- |
| Rv0508/- | (cc=0.6004) | info on Rv0508/- |
| Rv3278c/- | (cc=0.5974) | info on Rv3278c/- |
| Rv1072/- | (cc=0.5971) | info on Rv1072/- |
Correlation of Rv2793c/truB with Rv0668/rpoC
Normalized LFCs for Rv2793c/truB:
(description and provenance of datasets)
| Rv2793c/truB | Rv0668/rpoC | |
| Fe_supp_jason_reseq | -0.608 | 0.319 |
| low_pH_jason_reseq | 4.833 | 2.259 |
| NO_jason_reseq | 4.258 | 2.809 |
| B6_jason_reseq | -0.921 | 1.836 |
| MHCII_jason_reseq | -2.248 | -0.149 |
| Isoniazid02 | -1.823 | -0.108 |
| Rifampicin4 | -1.516 | 1.172 |
| Ethambutol3 | -3.205 | -0.626 |
| Meropenem3 | -2.159 | -0.182 |
| Vancomycin16 | -2.175 | -0.196 |
| Rv2680_day32 | -0.947 | 0.0 |
| H37Rv_KO_MarP | -1.139 | 0.203 |
| hypoxia_3wks | 0.0 | -1.934 |
| hypoxia_6wks | -0.163 | 1.293 |
| glycerol | 0.753 | 0.12 |
| cholesterol | -0.509 | 0.0 |
| AJ | 0.866 | 0.934 |
| Bibs02 | 0.0 | -0.371 |
| Bibs02c | 0.887 | 0.124 |
| BL6 | 1.039 | 1.017 |
| BL6a | 1.712 | 1.175 |
| BXD01 | 4.61 | 2.02 |
| BXD010 | 2.013 | 1.496 |
| BXD011 | 1.797 | 2.698 |
| BXD03 | 2.515 | 1.173 |
| BXD04 | 4.249 | 2.865 |
| BXD05 | 0.636 | 2.213 |
| BXD06 | 2.913 | 1.994 |
| BXD07 | 1.871 | 1.825 |
| BXD08 | 2.89 | 2.118 |
| BXD09 | 2.232 | 0.974 |
| CAST | 1.582 | 1.023 |
| CCcont | 1.291 | 0.663 |
| DS01 | 0.479 | 0.522 |
| DS02 | 0.922 | 0.129 |
| DS04 | 0.0 | 0.523 |
| DS0c | -0.547 | -0.137 |
| GP01 | -0.347 | -0.277 |
| GP02 | 0.06 | -0.303 |
| GP0c | -0.457 | 0.577 |
| NOD | -0.789 | -0.142 |
| NZO | 2.387 | 0.886 |
| PWK | 3.574 | 1.537 |
| H37Rv_KO_CtpC | 3.196 | -0.455 |
| H37Rv_KO_CtpD | 0.0 | 0.51 |
| H37Rv_KO_Rv1272 | 0.912 | 0.239 |
| H37Rv_KO_SugABC | 1.006 | 1.074 |
| H37Rv_KO_MbtN | 0.0 | 1.0 |
| Trans05 | 1.041 | 1.024 |
| macrophage_unactivated | -2.374 | -0.581 |
| IL1 | -1.056 | -1.406 |
| Rapamycin | -0.592 | -0.368 |
| Tcell | 0.808 | 0.362 |
| GMCSF | -1.605 | -1.046 |
| IFNab | -0.741 | -0.363 |
| IFNg | -0.249 | -0.673 |
| IFNg_GMCSF1 | -1.91 | -1.012 |
| Rv1432_day32 | -0.441 | 0.139 |
| Rv1565c_day32 | -1.579 | -0.588 |
| secA2_input | 1.404 | 0.445 |
| delta_Rv3594 | -3.694 | -0.061 |
| delta_Rv3717 | -2.848 | 1.233 |
| delta_Rv3811 | -2.974 | 0.559 |
| delta_Rv0954 | -3.46 | -1.562 |
| PonA1 | -0.035 | -1.2 |
| EccD1_KO | 0.0 | 0.0 |
| EspI_KO | 0.305 | 0.211 |
| PE35_KO | 0.601 | 0.42 |
| PPE68_KO | 1.501 | -0.512 |
| glycerol2 | -1.401 | -1.073 |
| lignocerate | -0.947 | -0.22 |
| oleate | -1.596 | -1.086 |
| phosphatidylcholine | -1.239 | 0.224 |
| acetate | 0.535 | 0.507 |
| glucAc | 1.065 | 0.279 |
| Rv0950ko | 0.139 | 0.0 |
| Rv1096ko | -1.113 | -0.832 |
| Rv3684ko | -0.314 | -1.159 |
| delta_otsA_trehalose | 0.0 | -0.773 |