Top 10 genes with highest correlation to Rv2681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
| Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.7064) | info on Rv3354/- |
| Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
| Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
| Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
| Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
| Rv3204/- | (cc=0.6598) | info on Rv3204/- |
| Rv3295/- | (cc=0.6587) | info on Rv3295/- |
| Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv3651/-
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
| Rv2681/- | Rv3651/- | |
| Fe_supp_jason_reseq | 1.628 | 0.923 |
| low_pH_jason_reseq | 0.102 | -0.979 |
| NO_jason_reseq | -1.494 | -2.625 |
| B6_jason_reseq | -1.794 | -0.496 |
| MHCII_jason_reseq | 0.06 | -0.503 |
| Isoniazid02 | 1.116 | -0.528 |
| Rifampicin4 | 0.0 | -1.584 |
| Ethambutol3 | -0.528 | -0.64 |
| Meropenem3 | 0.074 | 1.677 |
| Vancomycin16 | -1.804 | -0.828 |
| Rv2680_day32 | -0.971 | -0.883 |
| H37Rv_KO_MarP | 1.769 | 0.674 |
| hypoxia_3wks | -0.969 | -2.333 |
| hypoxia_6wks | -1.355 | -1.894 |
| glycerol | 1.17 | 2.73 |
| cholesterol | -0.141 | 1.434 |
| AJ | -0.901 | 0.918 |
| Bibs02 | -0.624 | 0.525 |
| Bibs02c | -0.873 | 1.682 |
| BL6 | -2.702 | -2.121 |
| BL6a | -1.543 | 0.63 |
| BXD01 | -3.117 | -1.751 |
| BXD010 | -3.065 | -2.715 |
| BXD011 | -2.752 | -2.35 |
| BXD03 | -2.921 | -1.959 |
| BXD04 | -2.49 | -2.187 |
| BXD05 | -2.979 | -2.282 |
| BXD06 | -3.285 | -2.463 |
| BXD07 | -3.407 | -2.348 |
| BXD08 | -3.273 | -1.202 |
| BXD09 | -3.274 | -2.036 |
| CAST | -0.125 | 0.297 |
| CCcont | -1.248 | -0.318 |
| DS01 | 0.713 | 2.156 |
| DS02 | 1.419 | 2.046 |
| DS04 | 0.914 | 1.941 |
| DS0c | 0.369 | 2.549 |
| GP01 | -2.66 | 0.873 |
| GP02 | -2.4 | -0.752 |
| GP0c | -3.503 | -0.255 |
| NOD | -0.029 | 1.206 |
| NZO | -1.342 | -0.172 |
| PWK | 0.473 | 0.18 |
| H37Rv_KO_CtpC | -1.589 | -0.459 |
| H37Rv_KO_CtpD | -0.579 | -0.358 |
| H37Rv_KO_Rv1272 | -2.354 | -2.989 |
| H37Rv_KO_SugABC | -1.995 | -1.491 |
| H37Rv_KO_MbtN | -2.226 | -1.493 |
| Trans05 | -2.413 | -2.769 |
| macrophage_unactivated | -2.702 | -0.35 |
| IL1 | -3.197 | -1.284 |
| Rapamycin | -2.627 | -2.047 |
| Tcell | -2.789 | -1.906 |
| GMCSF | -3.063 | -0.958 |
| IFNab | -3.773 | -1.533 |
| IFNg | -3.1 | -1.783 |
| IFNg_GMCSF1 | -2.275 | 0.0 |
| Rv1432_day32 | -2.117 | -0.632 |
| Rv1565c_day32 | 0.625 | 0.706 |
| secA2_input | 0.518 | 0.736 |
| delta_Rv3594 | -2.518 | 0.938 |
| delta_Rv3717 | -3.253 | 0.384 |
| delta_Rv3811 | -2.858 | -0.129 |
| delta_Rv0954 | -0.079 | 2.766 |
| PonA1 | 0.705 | 0.77 |
| EccD1_KO | -0.066 | 0.77 |
| EspI_KO | 0.217 | 1.243 |
| PE35_KO | 0.432 | 2.051 |
| PPE68_KO | -0.39 | 0.749 |
| glycerol2 | 0.863 | -0.588 |
| lignocerate | -0.242 | -0.605 |
| oleate | -0.846 | -0.819 |
| phosphatidylcholine | 0.731 | -0.296 |
| acetate | 0.15 | 0.326 |
| glucAc | 1.115 | -0.686 |
| Rv0950ko | -0.482 | -0.217 |
| Rv1096ko | -0.57 | 1.279 |
| Rv3684ko | -0.91 | 1.3 |
| delta_otsA_trehalose | 1.041 | 1.864 |