Top 10 genes with highest correlation to Rv2681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
| Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.7064) | info on Rv3354/- |
| Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
| Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
| Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
| Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
| Rv3204/- | (cc=0.6598) | info on Rv3204/- |
| Rv3295/- | (cc=0.6587) | info on Rv3295/- |
| Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv3295/-
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
| Rv2681/- | Rv3295/- | |
| Fe_supp_jason_reseq | 1.628 | -0.311 |
| low_pH_jason_reseq | 0.102 | -1.467 |
| NO_jason_reseq | -1.494 | 0.399 |
| B6_jason_reseq | -1.794 | 1.709 |
| MHCII_jason_reseq | 0.06 | 2.745 |
| Isoniazid02 | 1.116 | -0.08 |
| Rifampicin4 | 0.0 | -0.736 |
| Ethambutol3 | -0.528 | -0.766 |
| Meropenem3 | 0.074 | 1.594 |
| Vancomycin16 | -1.804 | -2.144 |
| Rv2680_day32 | -0.971 | -0.028 |
| H37Rv_KO_MarP | 1.769 | 0.872 |
| hypoxia_3wks | -0.969 | 0.04 |
| hypoxia_6wks | -1.355 | 0.069 |
| glycerol | 1.17 | -1.066 |
| cholesterol | -0.141 | -0.911 |
| AJ | -0.901 | -0.094 |
| Bibs02 | -0.624 | -0.197 |
| Bibs02c | -0.873 | -0.488 |
| BL6 | -2.702 | -1.617 |
| BL6a | -1.543 | -1.21 |
| BXD01 | -3.117 | -2.04 |
| BXD010 | -3.065 | -1.261 |
| BXD011 | -2.752 | -1.45 |
| BXD03 | -2.921 | -1.975 |
| BXD04 | -2.49 | -1.206 |
| BXD05 | -2.979 | -1.799 |
| BXD06 | -3.285 | -1.84 |
| BXD07 | -3.407 | -1.907 |
| BXD08 | -3.273 | -2.202 |
| BXD09 | -3.274 | -1.692 |
| CAST | -0.125 | -0.377 |
| CCcont | -1.248 | -2.55 |
| DS01 | 0.713 | -0.573 |
| DS02 | 1.419 | -0.243 |
| DS04 | 0.914 | -1.214 |
| DS0c | 0.369 | -0.159 |
| GP01 | -2.66 | -0.495 |
| GP02 | -2.4 | -1.862 |
| GP0c | -3.503 | -3.192 |
| NOD | -0.029 | 0.265 |
| NZO | -1.342 | 0.438 |
| PWK | 0.473 | -0.034 |
| H37Rv_KO_CtpC | -1.589 | -1.189 |
| H37Rv_KO_CtpD | -0.579 | -0.309 |
| H37Rv_KO_Rv1272 | -2.354 | -0.822 |
| H37Rv_KO_SugABC | -1.995 | -1.536 |
| H37Rv_KO_MbtN | -2.226 | -2.764 |
| Trans05 | -2.413 | -1.09 |
| macrophage_unactivated | -2.702 | -3.033 |
| IL1 | -3.197 | -2.637 |
| Rapamycin | -2.627 | -2.998 |
| Tcell | -2.789 | -2.77 |
| GMCSF | -3.063 | -2.389 |
| IFNab | -3.773 | -4.099 |
| IFNg | -3.1 | -1.86 |
| IFNg_GMCSF1 | -2.275 | -1.555 |
| Rv1432_day32 | -2.117 | 0.528 |
| Rv1565c_day32 | 0.625 | 1.414 |
| secA2_input | 0.518 | 0.819 |
| delta_Rv3594 | -2.518 | -0.159 |
| delta_Rv3717 | -3.253 | -0.35 |
| delta_Rv3811 | -2.858 | -0.437 |
| delta_Rv0954 | -0.079 | -0.012 |
| PonA1 | 0.705 | 0.697 |
| EccD1_KO | -0.066 | -0.536 |
| EspI_KO | 0.217 | -0.442 |
| PE35_KO | 0.432 | -0.096 |
| PPE68_KO | -0.39 | 0.067 |
| glycerol2 | 0.863 | 2.42 |
| lignocerate | -0.242 | 1.125 |
| oleate | -0.846 | -0.113 |
| phosphatidylcholine | 0.731 | 2.459 |
| acetate | 0.15 | 0.436 |
| glucAc | 1.115 | 0.323 |
| Rv0950ko | -0.482 | 1.019 |
| Rv1096ko | -0.57 | 0.338 |
| Rv3684ko | -0.91 | 0.907 |
| delta_otsA_trehalose | 1.041 | 0.261 |