Top 10 genes with highest correlation to Rv2681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
| Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.7064) | info on Rv3354/- |
| Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
| Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
| Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
| Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
| Rv3204/- | (cc=0.6598) | info on Rv3204/- |
| Rv3295/- | (cc=0.6587) | info on Rv3295/- |
| Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv1180/pks3
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
| Rv2681/- | Rv1180/pks3 | |
| Fe_supp_jason_reseq | 1.628 | -0.279 |
| low_pH_jason_reseq | 0.102 | 2.652 |
| NO_jason_reseq | -1.494 | 0.0 |
| B6_jason_reseq | -1.794 | 2.843 |
| MHCII_jason_reseq | 0.06 | 3.318 |
| Isoniazid02 | 1.116 | -0.345 |
| Rifampicin4 | 0.0 | -0.374 |
| Ethambutol3 | -0.528 | 0.176 |
| Meropenem3 | 0.074 | -0.865 |
| Vancomycin16 | -1.804 | 0.225 |
| Rv2680_day32 | -0.971 | -0.493 |
| H37Rv_KO_MarP | 1.769 | 0.415 |
| hypoxia_3wks | -0.969 | -0.319 |
| hypoxia_6wks | -1.355 | 0.234 |
| glycerol | 1.17 | -0.016 |
| cholesterol | -0.141 | 0.163 |
| AJ | -0.901 | 0.356 |
| Bibs02 | -0.624 | -0.254 |
| Bibs02c | -0.873 | 0.646 |
| BL6 | -2.702 | -2.892 |
| BL6a | -1.543 | -0.405 |
| BXD01 | -3.117 | -2.644 |
| BXD010 | -3.065 | -1.603 |
| BXD011 | -2.752 | -2.421 |
| BXD03 | -2.921 | -1.964 |
| BXD04 | -2.49 | -1.702 |
| BXD05 | -2.979 | -1.519 |
| BXD06 | -3.285 | -2.271 |
| BXD07 | -3.407 | -2.302 |
| BXD08 | -3.273 | -2.404 |
| BXD09 | -3.274 | -2.206 |
| CAST | -0.125 | 0.307 |
| CCcont | -1.248 | -2.242 |
| DS01 | 0.713 | 0.371 |
| DS02 | 1.419 | 0.298 |
| DS04 | 0.914 | 0.292 |
| DS0c | 0.369 | 0.093 |
| GP01 | -2.66 | -1.877 |
| GP02 | -2.4 | -1.623 |
| GP0c | -3.503 | -3.264 |
| NOD | -0.029 | -0.194 |
| NZO | -1.342 | 0.069 |
| PWK | 0.473 | 0.374 |
| H37Rv_KO_CtpC | -1.589 | -1.492 |
| H37Rv_KO_CtpD | -0.579 | -2.799 |
| H37Rv_KO_Rv1272 | -2.354 | -2.581 |
| H37Rv_KO_SugABC | -1.995 | -1.747 |
| H37Rv_KO_MbtN | -2.226 | -1.345 |
| Trans05 | -2.413 | -1.761 |
| macrophage_unactivated | -2.702 | -3.27 |
| IL1 | -3.197 | -2.174 |
| Rapamycin | -2.627 | -1.534 |
| Tcell | -2.789 | -3.454 |
| GMCSF | -3.063 | -2.609 |
| IFNab | -3.773 | -2.276 |
| IFNg | -3.1 | -3.175 |
| IFNg_GMCSF1 | -2.275 | -1.518 |
| Rv1432_day32 | -2.117 | 0.411 |
| Rv1565c_day32 | 0.625 | 0.692 |
| secA2_input | 0.518 | 0.944 |
| delta_Rv3594 | -2.518 | 0.2 |
| delta_Rv3717 | -3.253 | -1.016 |
| delta_Rv3811 | -2.858 | -1.142 |
| delta_Rv0954 | -0.079 | -1.262 |
| PonA1 | 0.705 | 0.077 |
| EccD1_KO | -0.066 | 1.457 |
| EspI_KO | 0.217 | -0.106 |
| PE35_KO | 0.432 | 0.694 |
| PPE68_KO | -0.39 | 0.557 |
| glycerol2 | 0.863 | -0.684 |
| lignocerate | -0.242 | 0.737 |
| oleate | -0.846 | -0.489 |
| phosphatidylcholine | 0.731 | -0.066 |
| acetate | 0.15 | -0.299 |
| glucAc | 1.115 | -0.016 |
| Rv0950ko | -0.482 | 1.227 |
| Rv1096ko | -0.57 | 0.826 |
| Rv3684ko | -0.91 | 0.419 |
| delta_otsA_trehalose | 1.041 | 0.724 |