Top 10 genes with highest correlation to Rv2681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
| Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.7064) | info on Rv3354/- |
| Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
| Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
| Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
| Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
| Rv3204/- | (cc=0.6598) | info on Rv3204/- |
| Rv3295/- | (cc=0.6587) | info on Rv3295/- |
| Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv3354/-
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
| Rv2681/- | Rv3354/- | |
| Fe_supp_jason_reseq | 1.628 | -1.138 |
| low_pH_jason_reseq | 0.102 | -0.381 |
| NO_jason_reseq | -1.494 | -0.793 |
| B6_jason_reseq | -1.794 | 0.985 |
| MHCII_jason_reseq | 0.06 | 1.019 |
| Isoniazid02 | 1.116 | 1.043 |
| Rifampicin4 | 0.0 | 0.125 |
| Ethambutol3 | -0.528 | 0.398 |
| Meropenem3 | 0.074 | 1.179 |
| Vancomycin16 | -1.804 | 0.162 |
| Rv2680_day32 | -0.971 | 0.659 |
| H37Rv_KO_MarP | 1.769 | 0.422 |
| hypoxia_3wks | -0.969 | -0.347 |
| hypoxia_6wks | -1.355 | -0.595 |
| glycerol | 1.17 | 0.674 |
| cholesterol | -0.141 | 0.892 |
| AJ | -0.901 | -0.171 |
| Bibs02 | -0.624 | -0.029 |
| Bibs02c | -0.873 | 0.596 |
| BL6 | -2.702 | -0.912 |
| BL6a | -1.543 | -0.067 |
| BXD01 | -3.117 | -1.687 |
| BXD010 | -3.065 | -1.434 |
| BXD011 | -2.752 | -2.812 |
| BXD03 | -2.921 | -2.487 |
| BXD04 | -2.49 | -1.729 |
| BXD05 | -2.979 | -1.146 |
| BXD06 | -3.285 | -1.932 |
| BXD07 | -3.407 | -2.262 |
| BXD08 | -3.273 | -1.667 |
| BXD09 | -3.274 | -2.542 |
| CAST | -0.125 | 0.097 |
| CCcont | -1.248 | -1.82 |
| DS01 | 0.713 | -0.077 |
| DS02 | 1.419 | 0.269 |
| DS04 | 0.914 | 0.395 |
| DS0c | 0.369 | -0.597 |
| GP01 | -2.66 | -1.486 |
| GP02 | -2.4 | -0.295 |
| GP0c | -3.503 | -0.754 |
| NOD | -0.029 | -0.169 |
| NZO | -1.342 | 0.127 |
| PWK | 0.473 | 0.367 |
| H37Rv_KO_CtpC | -1.589 | -0.788 |
| H37Rv_KO_CtpD | -0.579 | -1.146 |
| H37Rv_KO_Rv1272 | -2.354 | -0.927 |
| H37Rv_KO_SugABC | -1.995 | -0.855 |
| H37Rv_KO_MbtN | -2.226 | -1.624 |
| Trans05 | -2.413 | -0.244 |
| macrophage_unactivated | -2.702 | -1.654 |
| IL1 | -3.197 | -1.649 |
| Rapamycin | -2.627 | -1.034 |
| Tcell | -2.789 | -1.473 |
| GMCSF | -3.063 | -2.118 |
| IFNab | -3.773 | -2.056 |
| IFNg | -3.1 | -0.949 |
| IFNg_GMCSF1 | -2.275 | -0.641 |
| Rv1432_day32 | -2.117 | 0.3 |
| Rv1565c_day32 | 0.625 | 0.635 |
| secA2_input | 0.518 | 0.645 |
| delta_Rv3594 | -2.518 | -0.395 |
| delta_Rv3717 | -3.253 | -0.21 |
| delta_Rv3811 | -2.858 | 0.592 |
| delta_Rv0954 | -0.079 | 0.58 |
| PonA1 | 0.705 | -0.802 |
| EccD1_KO | -0.066 | 1.217 |
| EspI_KO | 0.217 | 1.201 |
| PE35_KO | 0.432 | 0.204 |
| PPE68_KO | -0.39 | 1.254 |
| glycerol2 | 0.863 | 1.595 |
| lignocerate | -0.242 | 1.672 |
| oleate | -0.846 | 0.822 |
| phosphatidylcholine | 0.731 | 1.291 |
| acetate | 0.15 | 1.047 |
| glucAc | 1.115 | 1.449 |
| Rv0950ko | -0.482 | 0.365 |
| Rv1096ko | -0.57 | 0.268 |
| Rv3684ko | -0.91 | 0.933 |
| delta_otsA_trehalose | 1.041 | 0.808 |