Top 10 genes with highest correlation to Rv2681/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
| Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.7064) | info on Rv3354/- |
| Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
| Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
| Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
| Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
| Rv3204/- | (cc=0.6598) | info on Rv3204/- |
| Rv3295/- | (cc=0.6587) | info on Rv3295/- |
| Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv0840c/pip
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
| Rv2681/- | Rv0840c/pip | |
| Fe_supp_jason_reseq | 1.628 | 0.188 |
| low_pH_jason_reseq | 0.102 | -0.179 |
| NO_jason_reseq | -1.494 | -0.11 |
| B6_jason_reseq | -1.794 | 0.235 |
| MHCII_jason_reseq | 0.06 | 1.249 |
| Isoniazid02 | 1.116 | 1.206 |
| Rifampicin4 | 0.0 | -0.014 |
| Ethambutol3 | -0.528 | 1.4 |
| Meropenem3 | 0.074 | 0.355 |
| Vancomycin16 | -1.804 | -0.305 |
| Rv2680_day32 | -0.971 | 0.455 |
| H37Rv_KO_MarP | 1.769 | 0.567 |
| hypoxia_3wks | -0.969 | -0.311 |
| hypoxia_6wks | -1.355 | -0.163 |
| glycerol | 1.17 | -0.829 |
| cholesterol | -0.141 | -0.447 |
| AJ | -0.901 | -0.363 |
| Bibs02 | -0.624 | 0.172 |
| Bibs02c | -0.873 | 0.8 |
| BL6 | -2.702 | -0.557 |
| BL6a | -1.543 | 0.017 |
| BXD01 | -3.117 | -0.899 |
| BXD010 | -3.065 | -0.973 |
| BXD011 | -2.752 | -0.923 |
| BXD03 | -2.921 | -0.402 |
| BXD04 | -2.49 | -0.779 |
| BXD05 | -2.979 | -1.08 |
| BXD06 | -3.285 | -1.231 |
| BXD07 | -3.407 | -1.201 |
| BXD08 | -3.273 | -0.659 |
| BXD09 | -3.274 | -0.39 |
| CAST | -0.125 | -0.095 |
| CCcont | -1.248 | -0.209 |
| DS01 | 0.713 | 0.72 |
| DS02 | 1.419 | 0.194 |
| DS04 | 0.914 | 0.921 |
| DS0c | 0.369 | 0.676 |
| GP01 | -2.66 | -0.938 |
| GP02 | -2.4 | -0.244 |
| GP0c | -3.503 | -0.562 |
| NOD | -0.029 | 0.254 |
| NZO | -1.342 | -0.444 |
| PWK | 0.473 | -0.865 |
| H37Rv_KO_CtpC | -1.589 | -1.366 |
| H37Rv_KO_CtpD | -0.579 | -0.08 |
| H37Rv_KO_Rv1272 | -2.354 | -0.239 |
| H37Rv_KO_SugABC | -1.995 | -0.256 |
| H37Rv_KO_MbtN | -2.226 | 0.202 |
| Trans05 | -2.413 | -0.559 |
| macrophage_unactivated | -2.702 | -0.379 |
| IL1 | -3.197 | -1.267 |
| Rapamycin | -2.627 | -0.638 |
| Tcell | -2.789 | -0.984 |
| GMCSF | -3.063 | -0.082 |
| IFNab | -3.773 | -0.846 |
| IFNg | -3.1 | -0.708 |
| IFNg_GMCSF1 | -2.275 | -0.44 |
| Rv1432_day32 | -2.117 | -0.501 |
| Rv1565c_day32 | 0.625 | 0.951 |
| secA2_input | 0.518 | -0.077 |
| delta_Rv3594 | -2.518 | -0.627 |
| delta_Rv3717 | -3.253 | -0.753 |
| delta_Rv3811 | -2.858 | -0.706 |
| delta_Rv0954 | -0.079 | -0.136 |
| PonA1 | 0.705 | -0.274 |
| EccD1_KO | -0.066 | 1.089 |
| EspI_KO | 0.217 | 1.286 |
| PE35_KO | 0.432 | 0.665 |
| PPE68_KO | -0.39 | 0.784 |
| glycerol2 | 0.863 | 0.031 |
| lignocerate | -0.242 | -0.013 |
| oleate | -0.846 | -0.04 |
| phosphatidylcholine | 0.731 | 0.113 |
| acetate | 0.15 | -0.254 |
| glucAc | 1.115 | 0.045 |
| Rv0950ko | -0.482 | 0.431 |
| Rv1096ko | -0.57 | 0.22 |
| Rv3684ko | -0.91 | -0.36 |
| delta_otsA_trehalose | 1.041 | 1.128 |