Top 10 genes with highest correlation to Rv2681/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2752c/- | (cc=0.7091) | info on Rv2752c/- |
Rv1323/fadA4 | (cc=0.7087) | info on Rv1323/fadA4 |
Rv3354/- | (cc=0.7064) | info on Rv3354/- |
Rv0470A/- | (cc=0.6842) | info on Rv0470A/- |
Rv1180/pks3 | (cc=0.6772) | info on Rv1180/pks3 |
Rv1542c/glbN | (cc=0.6711) | info on Rv1542c/glbN |
Rv0840c/pip | (cc=0.671) | info on Rv0840c/pip |
Rv3204/- | (cc=0.6598) | info on Rv3204/- |
Rv3295/- | (cc=0.6587) | info on Rv3295/- |
Rv3651/- | (cc=0.6532) | info on Rv3651/- |
Correlation of Rv2681/- with Rv2752c/-
Normalized LFCs for Rv2681/-:
(description and provenance of datasets)
Rv2681/- | Rv2752c/- | |
Fe_supp_jason_reseq | 1.628 | 0.253 |
low_pH_jason_reseq | 0.102 | 2.295 |
NO_jason_reseq | -1.494 | 0.801 |
B6_jason_reseq | -1.794 | -0.493 |
MHCII_jason_reseq | 0.06 | 0.156 |
Isoniazid02 | 1.116 | 0.033 |
Rifampicin4 | 0.0 | -0.669 |
Ethambutol3 | -0.528 | -1.983 |
Meropenem3 | 0.074 | 1.687 |
Vancomycin16 | -1.804 | -3.725 |
Rv2680_day32 | -0.971 | -0.746 |
H37Rv_KO_MarP | 1.769 | 2.704 |
hypoxia_3wks | -0.969 | -0.606 |
hypoxia_6wks | -1.355 | -2.088 |
glycerol | 1.17 | -0.41 |
cholesterol | -0.141 | -0.881 |
AJ | -0.901 | -1.247 |
Bibs02 | -0.624 | -3.02 |
Bibs02c | -0.873 | -1.311 |
BL6 | -2.702 | -1.839 |
BL6a | -1.543 | -2.099 |
BXD01 | -3.117 | -1.969 |
BXD010 | -3.065 | -1.83 |
BXD011 | -2.752 | -1.926 |
BXD03 | -2.921 | -1.932 |
BXD04 | -2.49 | -1.539 |
BXD05 | -2.979 | -2.291 |
BXD06 | -3.285 | -2.078 |
BXD07 | -3.407 | -2.287 |
BXD08 | -3.273 | -2.491 |
BXD09 | -3.274 | -1.953 |
CAST | -0.125 | -0.873 |
CCcont | -1.248 | -0.321 |
DS01 | 0.713 | 0.231 |
DS02 | 1.419 | -0.137 |
DS04 | 0.914 | 0.153 |
DS0c | 0.369 | 0.602 |
GP01 | -2.66 | -2.298 |
GP02 | -2.4 | -1.258 |
GP0c | -3.503 | -3.026 |
NOD | -0.029 | -0.63 |
NZO | -1.342 | -1.9 |
PWK | 0.473 | -1.633 |
H37Rv_KO_CtpC | -1.589 | -1.177 |
H37Rv_KO_CtpD | -0.579 | 0.371 |
H37Rv_KO_Rv1272 | -2.354 | -2.401 |
H37Rv_KO_SugABC | -1.995 | -1.855 |
H37Rv_KO_MbtN | -2.226 | -1.995 |
Trans05 | -2.413 | -1.92 |
macrophage_unactivated | -2.702 | -1.502 |
IL1 | -3.197 | -2.011 |
Rapamycin | -2.627 | -0.921 |
Tcell | -2.789 | -0.798 |
GMCSF | -3.063 | -1.985 |
IFNab | -3.773 | -2.273 |
IFNg | -3.1 | -2.218 |
IFNg_GMCSF1 | -2.275 | -1.304 |
Rv1432_day32 | -2.117 | -1.304 |
Rv1565c_day32 | 0.625 | 0.096 |
secA2_input | 0.518 | 0.806 |
delta_Rv3594 | -2.518 | -1.807 |
delta_Rv3717 | -3.253 | -2.222 |
delta_Rv3811 | -2.858 | -2.235 |
delta_Rv0954 | -0.079 | 0.563 |
PonA1 | 0.705 | 2.029 |
EccD1_KO | -0.066 | -1.658 |
EspI_KO | 0.217 | -2.056 |
PE35_KO | 0.432 | -0.671 |
PPE68_KO | -0.39 | -0.077 |
glycerol2 | 0.863 | -0.228 |
lignocerate | -0.242 | -0.826 |
oleate | -0.846 | -2.321 |
phosphatidylcholine | 0.731 | -0.27 |
acetate | 0.15 | 0.763 |
glucAc | 1.115 | 0.834 |
Rv0950ko | -0.482 | 0.244 |
Rv1096ko | -0.57 | -1.978 |
Rv3684ko | -0.91 | -1.241 |
delta_otsA_trehalose | 1.041 | 0.199 |