Top 10 genes with highest correlation to Rv2636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.6983) | info on Rv3354/- |
| Rv1180/pks3 | (cc=0.6564) | info on Rv1180/pks3 |
| Rv3295/- | (cc=0.6491) | info on Rv3295/- |
| Rv1181/pks4 | (cc=0.6488) | info on Rv1181/pks4 |
| Rv2032/acg | (cc=0.6246) | info on Rv2032/acg |
| Rv1999c/- | (cc=0.6215) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.6201) | info on Rv2687c/- |
| Rv1974/- | (cc=0.6183) | info on Rv1974/- |
| Rv1834/lipZ | (cc=0.6178) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.6164) | info on Rv0136/cyp138 |
Correlation of Rv2636/- with Rv1999c/-
Normalized LFCs for Rv2636/-:
(description and provenance of datasets)
| Rv2636/- | Rv1999c/- | |
| Fe_supp_jason_reseq | -0.073 | 0.032 |
| low_pH_jason_reseq | -0.942 | -0.609 |
| NO_jason_reseq | 0.071 | 0.239 |
| B6_jason_reseq | 1.243 | -0.061 |
| MHCII_jason_reseq | 1.783 | 0.316 |
| Isoniazid02 | -0.55 | 0.188 |
| Rifampicin4 | 0.162 | 0.628 |
| Ethambutol3 | 0.417 | 0.17 |
| Meropenem3 | -1.06 | -0.29 |
| Vancomycin16 | -0.642 | 0.032 |
| Rv2680_day32 | 1.092 | 0.398 |
| H37Rv_KO_MarP | 0.013 | -0.042 |
| hypoxia_3wks | 0.056 | -0.227 |
| hypoxia_6wks | -0.186 | -0.397 |
| glycerol | 0.263 | -0.499 |
| cholesterol | 0.048 | -0.351 |
| AJ | 0.345 | -0.097 |
| Bibs02 | 0.177 | 0.007 |
| Bibs02c | 0.358 | -0.088 |
| BL6 | -0.987 | -0.925 |
| BL6a | -0.442 | -0.676 |
| BXD01 | -1.222 | -0.679 |
| BXD010 | -0.989 | -0.928 |
| BXD011 | -1.507 | -0.795 |
| BXD03 | -1.037 | -0.578 |
| BXD04 | -1.588 | -0.7 |
| BXD05 | -0.968 | -1.079 |
| BXD06 | -1.495 | -0.89 |
| BXD07 | -1.077 | -0.664 |
| BXD08 | -0.781 | -0.867 |
| BXD09 | -1.87 | -0.907 |
| CAST | 0.174 | -0.35 |
| CCcont | -1.767 | -0.974 |
| DS01 | 0.399 | 0.053 |
| DS02 | 0.578 | 0.118 |
| DS04 | -0.409 | 0.333 |
| DS0c | 0.083 | -0.515 |
| GP01 | -0.456 | 0.218 |
| GP02 | -0.744 | -0.615 |
| GP0c | -0.677 | -0.365 |
| NOD | 0.574 | -0.202 |
| NZO | 0.126 | -0.228 |
| PWK | -0.057 | -0.359 |
| H37Rv_KO_CtpC | -1.77 | -1.177 |
| H37Rv_KO_CtpD | -0.581 | -0.724 |
| H37Rv_KO_Rv1272 | -1.089 | -0.021 |
| H37Rv_KO_SugABC | -1.719 | -0.338 |
| H37Rv_KO_MbtN | -0.848 | -0.29 |
| Trans05 | -0.088 | -0.035 |
| macrophage_unactivated | -0.653 | -0.038 |
| IL1 | -0.445 | -0.522 |
| Rapamycin | -0.546 | -0.623 |
| Tcell | -0.867 | -0.238 |
| GMCSF | -0.446 | 0.356 |
| IFNab | -1.155 | -0.78 |
| IFNg | -0.136 | -0.505 |
| IFNg_GMCSF1 | -0.079 | 0.072 |
| Rv1432_day32 | -0.16 | 0.248 |
| Rv1565c_day32 | 0.062 | 0.122 |
| secA2_input | 1.133 | -0.374 |
| delta_Rv3594 | -0.601 | -0.021 |
| delta_Rv3717 | -0.271 | 0.216 |
| delta_Rv3811 | -0.458 | 0.326 |
| delta_Rv0954 | 0.151 | -0.335 |
| PonA1 | -0.324 | -0.308 |
| EccD1_KO | -0.151 | 0.296 |
| EspI_KO | 0.271 | -0.088 |
| PE35_KO | -0.079 | 0.63 |
| PPE68_KO | -0.266 | 0.31 |
| glycerol2 | 0.534 | 0.765 |
| lignocerate | 0.498 | 0.848 |
| oleate | 0.303 | 0.119 |
| phosphatidylcholine | 0.709 | 0.899 |
| acetate | 0.156 | 0.648 |
| glucAc | 0.155 | 0.925 |
| Rv0950ko | -0.027 | 0.199 |
| Rv1096ko | -0.25 | -0.13 |
| Rv3684ko | -0.662 | 0.445 |
| delta_otsA_trehalose | 0.719 | 0.475 |