Top 10 genes with highest correlation to Rv2636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.6983) | info on Rv3354/- |
| Rv1180/pks3 | (cc=0.6564) | info on Rv1180/pks3 |
| Rv3295/- | (cc=0.6491) | info on Rv3295/- |
| Rv1181/pks4 | (cc=0.6488) | info on Rv1181/pks4 |
| Rv2032/acg | (cc=0.6246) | info on Rv2032/acg |
| Rv1999c/- | (cc=0.6215) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.6201) | info on Rv2687c/- |
| Rv1974/- | (cc=0.6183) | info on Rv1974/- |
| Rv1834/lipZ | (cc=0.6178) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.6164) | info on Rv0136/cyp138 |
Correlation of Rv2636/- with Rv1974/-
Normalized LFCs for Rv2636/-:
(description and provenance of datasets)
| Rv2636/- | Rv1974/- | |
| Fe_supp_jason_reseq | -0.073 | 0.633 |
| low_pH_jason_reseq | -0.942 | 0.015 |
| NO_jason_reseq | 0.071 | -0.559 |
| B6_jason_reseq | 1.243 | 1.201 |
| MHCII_jason_reseq | 1.783 | 1.739 |
| Isoniazid02 | -0.55 | 0.106 |
| Rifampicin4 | 0.162 | -0.829 |
| Ethambutol3 | 0.417 | -0.062 |
| Meropenem3 | -1.06 | 1.264 |
| Vancomycin16 | -0.642 | 0.066 |
| Rv2680_day32 | 1.092 | 1.367 |
| H37Rv_KO_MarP | 0.013 | -0.95 |
| hypoxia_3wks | 0.056 | -0.801 |
| hypoxia_6wks | -0.186 | -0.319 |
| glycerol | 0.263 | -0.471 |
| cholesterol | 0.048 | -0.672 |
| AJ | 0.345 | -0.346 |
| Bibs02 | 0.177 | 0.268 |
| Bibs02c | 0.358 | 0.311 |
| BL6 | -0.987 | -1.414 |
| BL6a | -0.442 | -0.199 |
| BXD01 | -1.222 | -1.518 |
| BXD010 | -0.989 | -2.27 |
| BXD011 | -1.507 | -1.543 |
| BXD03 | -1.037 | -1.714 |
| BXD04 | -1.588 | -2.232 |
| BXD05 | -0.968 | -0.87 |
| BXD06 | -1.495 | -1.465 |
| BXD07 | -1.077 | -1.398 |
| BXD08 | -0.781 | -1.622 |
| BXD09 | -1.87 | -1.346 |
| CAST | 0.174 | 0.085 |
| CCcont | -1.767 | -1.236 |
| DS01 | 0.399 | 0.241 |
| DS02 | 0.578 | 0.117 |
| DS04 | -0.409 | -0.141 |
| DS0c | 0.083 | 0.006 |
| GP01 | -0.456 | 0.371 |
| GP02 | -0.744 | -0.885 |
| GP0c | -0.677 | -1.154 |
| NOD | 0.574 | -0.163 |
| NZO | 0.126 | 0.162 |
| PWK | -0.057 | -0.274 |
| H37Rv_KO_CtpC | -1.77 | -1.474 |
| H37Rv_KO_CtpD | -0.581 | -1.606 |
| H37Rv_KO_Rv1272 | -1.089 | -1.434 |
| H37Rv_KO_SugABC | -1.719 | -0.667 |
| H37Rv_KO_MbtN | -0.848 | -2.367 |
| Trans05 | -0.088 | -1.444 |
| macrophage_unactivated | -0.653 | -1.162 |
| IL1 | -0.445 | -0.688 |
| Rapamycin | -0.546 | -1.409 |
| Tcell | -0.867 | -1.466 |
| GMCSF | -0.446 | -1.288 |
| IFNab | -1.155 | -0.98 |
| IFNg | -0.136 | -0.818 |
| IFNg_GMCSF1 | -0.079 | -0.962 |
| Rv1432_day32 | -0.16 | -1.304 |
| Rv1565c_day32 | 0.062 | 0.156 |
| secA2_input | 1.133 | 0.167 |
| delta_Rv3594 | -0.601 | 0.941 |
| delta_Rv3717 | -0.271 | 0.837 |
| delta_Rv3811 | -0.458 | 1.031 |
| delta_Rv0954 | 0.151 | 1.516 |
| PonA1 | -0.324 | 0.54 |
| EccD1_KO | -0.151 | 0.408 |
| EspI_KO | 0.271 | 1.768 |
| PE35_KO | -0.079 | 1.053 |
| PPE68_KO | -0.266 | 0.464 |
| glycerol2 | 0.534 | 0.993 |
| lignocerate | 0.498 | 1.427 |
| oleate | 0.303 | -0.781 |
| phosphatidylcholine | 0.709 | 1.108 |
| acetate | 0.156 | 0.828 |
| glucAc | 0.155 | 1.372 |
| Rv0950ko | -0.027 | -0.22 |
| Rv1096ko | -0.25 | -0.383 |
| Rv3684ko | -0.662 | 1.349 |
| delta_otsA_trehalose | 0.719 | -0.124 |